Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq21186 100 3e-16 >seq21186 Length=250663 Score = 100 bits (110), Expect = 3e-16 Identities = 233/346 (67%), Gaps = 4/346 (1%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| ||| | || || || |||||| ||| || ||||| ||||||||| ||| | | Sbjct 172543 GCCAGCTCTTTGGGCGAGCTGAAGTCGTCCACATGGATGAAGGCGTCTCCCTGGAGGAAG 172484 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || ||||| || | || | | || || || | ||| || | ||| | || | Sbjct 172483 TTCTCGTAGTTTTGCCTTGGGGGGCCCAGGACCACGGGCACTGTACCCACAGACAGTGGG 172424 Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125 ||| ||||| || || || ||||| |||| | |||||||||||| || || ||||| Sbjct 172423 TTGTACAGTTTCTCTGTGATGTAGTCTTTGTGGATGGAGTTCTCAAAAGCCAGGTAGAAC 172364 Query 177126 TTACAGGAAGATAGTAGCGGG-ATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 || ||| | | | | ||| | | |||| | |||| || || ||||| | | | Sbjct 172363 TTGCAGCTGGCCA-TGGTGGGAAAGTAGTCCTGGTCGGAGATGTACTCTCCAAAGGCCTG 172305 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243 || || |||| | || ||||| || ||||| ||| || || || | ||| | Sbjct 172304 TCCATAGGCATGCACCTCGATGTGCTTGTACAGCTCGTTGTAATA-CTTGACCCGCACAT 172246 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 |||| | |||||| |||||||||| |||||| | | |||| |||| Sbjct 172245 GGTCCTGGTTCCAGTTGCTGACGATCCAGCAGATGAGCTTGTTCTT 172200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578243575776000