Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 578 1e-160
>seq21827
Length=6214
Score = 578 bits (640), Expect = 1e-160
Identities = 713/962 (74%), Gaps = 12/962 (1%)
Strand=Plus/Plus
Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591
||||||||||| |||| |||||||| ||||||| || | || ||| || |
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 5116
Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650
|||| || ||||| || |||||||| || || || || || |||||||| || || ||
Sbjct 5117 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710
||| || || || || |||||||||||||| || || || || ||| | |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768
| ||| || || || | || || ||||| || |||||||| ||| ||||||||
Sbjct 5237 TTCTGCA--GCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAA 5294
Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828
||| | ||||| || || || | | || | || | ||||| | |||| | |
Sbjct 5295 TGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCT 5354
Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888
||| ||||| || |||||||||||||| | || || || ||| | ||||||||| |
Sbjct 5355 TGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 5414
Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947
||||| || || ||||| |||||||| || |||| || ||||| | |||| || ||||
Sbjct 5415 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATCTATCCAATTGG 5473
Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007
||| || ||||| || || | ||||||| | || ||||| ||||| ||||||| |||| |
Sbjct 5474 TCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGAT 5533
Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067
||||||||||| || || ||||| || |||||||| || |||||| | || || |||||
Sbjct 5534 TGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGG 5593
Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGT 20127
||||||||| || || ||||||||||| ||||| ||||| |||| || | || | |||
Sbjct 5594 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGA 5652
Query 20128 GC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAG 20186
| | || || || ||| | ||| | || | ||||||| || || ||||| ||||
Sbjct 5653 TCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAG 5712
Query 20187 AGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTT 20246
| ||||| || |||||||| ||||||||||| ||||| || |||||||||||||| |||
Sbjct 5713 AAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 5772
Query 20247 CTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTT 20306
||||||||| |||||| ||||||||||||| ||||| ||||| || ||||| ||||
Sbjct 5773 GTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTT 5832
Query 20307 GGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACC 20366
||||| |||| || || || || ||||| ||||| | || |||||||| || ||||
Sbjct 5833 GGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACC 5892
Query 20367 AGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTG 20426
| || | | || | | |||||||| ||| |||| |||||||| ||| |||| ||||
Sbjct 5893 AATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTG 5952
Query 20427 CTAATCTCGGGT-TTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTT 20485
|||| || |||| | || || ||||||||||| || |||||||||||||| || || ||
Sbjct 5953 CTAA-CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTA 6011
Query 20486 GC 20487
||
Sbjct 6012 GC 6013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148782743067480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |