Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 603 3e-168
>seq21827
Length=6214
Score = 603 bits (668), Expect = 3e-168
Identities = 733/989 (74%), Gaps = 10/989 (1%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||||||||| || || |||||||| ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| | || ||| | ||| || ||||| || ||||||||||| |
Sbjct 5091 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| |||||||| || || || |||||| | || ||| |||||||||||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || || ||| | |||| | | ||| || || || | || || |||||
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCA--GCGATAGGTTTGCATTTTTACCC 5266
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
|| |||||||| ||| ||||||||||| | ||||| || || || | | || |
Sbjct 5267 GATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAAT 5326
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079
|| | ||||| | |||| || | ||| ||||| || |||||||||||||| |
Sbjct 5327 TGTTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTT 5386
Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139
|| || || ||||||||||||||| |||||| || |||||||||||||| || || |
Sbjct 5387 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 5446
Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199
||| || ||| | |||||||| |||||||||| |||| |||| ||||||| | ||
Sbjct 5447 TGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGG 5506
Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259
|| |||||| ||||||| |||| |||||||||| ||||| || |||||||| |||||
Sbjct 5507 AATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCA 5566
Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
||| || |||||| | || || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 5567 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 5626
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
||||| |||| || | || | ||| | | ||||| || ||| | | |||| ||
Sbjct 5627 TGGTTC-CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 5685
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| || |||| || || ||||| ||||| || || || || || ||||||||||| ||||
Sbjct 5686 AAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATT 5745
Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498
|||| || | || ||||| || || |||||||| |||||| |||| |||||
Sbjct 5746 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCC 5805
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558
| |||||||||||||| || || |||||||| | || | || | ||||| ||||| |
Sbjct 5806 TAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTT 5865
Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618
| ||||| ||||| || || || ||||| || | |||| | | |||||||| |||
Sbjct 5866 TTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 5925
Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678
|||| |||||||| ||| |||| ||||||||| | || | || || ||||| |||||||
Sbjct 5926 ATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTA 5985
Query 19679 ATGCTCATAACTTCCCACTTGATTTGGCT 19707
| |||||||||||||| || ||| | |||
Sbjct 5986 ACGCTCATAACTTCCCTCTAGATCTAGCT 6014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141105119739480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |