Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq25638 105 2e-19 seq15131 102 3e-18 seq8872 100 9e-18 seq22440 98.7 3e-17 seq20886 98.7 3e-17 seq20552 98.7 3e-17 seq1300 98.7 3e-17 seq10100 95.1 4e-16 seq18227 89.7 2e-14 seq1555 87.8 6e-14 >seq25638 Length=677622 Score = 105 bits (116), Expect = 2e-19 Identities = 64/68 (94%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 611480 GCCGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 611539 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 611540 CCGGGTTT 611547 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| || | Sbjct 612238 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTAATC 612297 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 612298 CCGGGTTTCGGC 612309 >seq15131 Length=1100876 Score = 102 bits (112), Expect = 3e-18 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 2761 TGTTTAT-GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCT 2819 |||| || ||| ||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 23800 TGTTGATAGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCT 23741 Query 2820 GGTTCAACCCCGGGCTTCAGC 2840 ||||| | |||||| ||| || Sbjct 23740 GGTTCGATCCCGGGTTTCGGC 23720 >seq8872 Length=130775 Score = 100 bits (110), Expect = 9e-18 Identities = 70/79 (89%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 2764 TTATGG--CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 |||||| | ||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 67684 TTATGGAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGG 67743 Query 2822 TTCAACCCCGGGCTTCAGC 2840 ||| | |||||| ||| || Sbjct 67744 TTCGATCCCGGGTTTCGGC 67762 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 67148 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 67207 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 67208 CCGGGTTTCGGC 67219 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 79111 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 79170 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 79171 CCGGGTTTCGGC 79182 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||||||||||| | | Sbjct 89540 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCCTGGTTCGATC 89481 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 89480 CCGGGTTTCGGC 89469 >seq22440 Length=739953 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 103469 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 103410 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 103409 CCGGGTTTCGGC 103398 >seq20886 Length=794527 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 383992 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 384051 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 384052 CCGGGTTTCGGC 384063 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 426610 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 426669 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 426670 CCGGGTTTCGGC 426681 >seq20552 Length=1901804 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1317979 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1317920 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1317919 CCGGGTTTCGGC 1317908 >seq1300 Length=129515 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 126016 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 125957 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 125956 CCGGGTTTCGGC 125945 >seq10100 Length=67047 Score = 95.1 bits (104), Expect = 4e-16 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 62033 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCA 62089 Score = 87.8 bits (96), Expect = 6e-14 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||| Sbjct 66676 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCCAGGCT 66617 Query 2836 T 2836 | Sbjct 66616 T 66616 >seq18227 Length=102807 Score = 89.7 bits (98), Expect = 2e-14 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||||||||| ||||||||||||||| |||||| ||||||||| | Sbjct 13814 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCACTGGTTCAATC 13873 Query 2829 CCGGGCTTC 2837 ||||| ||| Sbjct 13874 CCGGGTTTC 13882 >seq1555 Length=126598 Score = 87.8 bits (96), Expect = 6e-14 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 2771 TGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCC 2830 |||| |||||||| |||||||||||| |||||||||||||||||||||| |||||| || Sbjct 42372 TGAAATAGCTCAGGTGGGAGAGCATTTGACTGAAGATCTAAAGGTCCCTTGTTCAATCCT 42431 Query 2831 GGGCTT 2836 ||| || Sbjct 42432 GGGTTT 42437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15845082368700