Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq10742 91.5 1e-13 seq4874 87.8 2e-12 >seq10742 Length=3397572 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || || || | ||||| | || || ||| | | Sbjct 2148675 ATGCAGATCTTTGTTAAGACCCTGACTGGGAAGACCATCACTTTGGAGGTGGAACCTAGT 2148616 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || ||| || || ||||||||||| || || || || Sbjct 2148615 GACACCATTGAAAACGTCAAGGCAAAGATCCAGGACAAAGAGGGTATCCCTCCTGACCAA 2148556 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || |||| || || || || || ||||||| | | | || || ||||| Sbjct 2148555 CAGAGGCTGATTTTCGCTGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCAGACTACAAC 2148496 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAA 25404 |||||||| ||||||||| | || || ||| | |||||||||||||||| Sbjct 2148495 ATTCAAAAGGAATCCACCCTCCACTTGGTGCTGCGATTGAGAGGAGGAAA 2148446 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || || || | ||||| | || || ||| | | Sbjct 2148903 ATGCAGATCTTTGTTAAGACCCTGACTGGGAAGACCATCACTTTGGAGGTTGAACCAAGT 2148844 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || ||| | || ||| |||||| || ||||||||||| || || |||||| Sbjct 2148843 GACACCATTGAGAATGTGAAAGCCAAAATTCAAGACAAAGAGGGTATTCCTCCTGATCAG 2148784 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || || || |||| || || || || || ||||||| | | | || || ||||| Sbjct 2148783 CAGAGGCTGATTTTCGCTGGTAAGCAGCTAGAAGATGGCCGCACTCTCTCTGACTACAAC 2148724 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || |||||| | || | ||| || | |||||||||| Sbjct 2148723 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTACGTCTGAGAGGAGG 2148677 >seq4874 Length=535125 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| ||||| | ||||| ||||| | || || ||| | || || | || || || | Sbjct 501799 CAATATGCAGATCTTTGTGAAAACCCTCACTGGCAAAACCATTACCCTTGAGGTGGAGCC 501858 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || ||| ||||| ||| | || ||| || || ||||| ||||| || || ||||| Sbjct 501859 CAGCGACACTATTGAGAATGTTAAAGCCAAGATCCAAGATAAGGAGGGCATTCCCCCCGA 501918 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 |||||| || || || | | |||||||| || ||||||| | | || ||| || Sbjct 501919 TCAGCAGAGGCTGATCTTTGCTGGCAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTA 501978 Query 25351 CAATATTCAAAAAGAATCCACCATTCAT 25378 ||| || || |||||||| ||| | ||| Sbjct 501979 CAACATCCAGAAAGAATCTACCCTCCAT 502006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444949410499200