Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq23633 194 2e-43 seq23540 190 3e-42 seq22736 190 3e-42 seq1952 190 3e-42 seq23769 188 1e-41 seq17191 188 1e-41 seq23118 185 1e-40 seq21518 176 6e-38 seq19539 176 6e-38 seq20709 158 2e-32 seq8638 104 3e-16 seq23817 98.7 1e-14 seq20084 86.0 9e-11 >seq23633 Length=2564 Score = 194 bits (214), Expect = 2e-43 Identities = 181/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 1797 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 1850 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 1851 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1910 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 1911 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1970 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 1971 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2019 >seq23540 Length=2231 Score = 190 bits (210), Expect = 3e-42 Identities = 179/227 (79%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 591 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 538 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 537 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 478 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 477 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 418 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| ||||||||||| Sbjct 417 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 371 >seq22736 Length=8147 Score = 190 bits (210), Expect = 3e-42 Identities = 179/227 (79%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 5822 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 5769 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 5768 AGCATCATGAACTCATTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 5709 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 5708 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 5649 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| ||||||||||| Sbjct 5648 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 5602 >seq1952 Length=121728 Score = 190 bits (210), Expect = 3e-42 Identities = 179/227 (79%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 2095 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 2042 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 2041 AGCATCATGAACTCATTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1982 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 1981 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1922 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||||||| ||||||||||| Sbjct 1921 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 1875 >seq23769 Length=2378 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 510 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 563 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 564 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 623 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 624 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 683 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| |||||||| |||| Sbjct 684 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 732 >seq17191 Length=53944 Score = 188 bits (208), Expect = 1e-41 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 8976 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 8923 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 8922 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 8863 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 8862 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 8803 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| |||||||| |||| Sbjct 8802 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 8754 >seq23118 Length=227226 Score = 185 bits (204), Expect = 1e-40 Identities = 178/227 (78%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||||||||||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 225331 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 225278 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| | || ||||||||| |||||| ||| Sbjct 225277 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 225218 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 225217 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 225158 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| |||||||| ||||||||||| Sbjct 225157 CTCCTGCTGCCCGGAGAGCTGGCCAAACACGCCGTGTCCGAGGGCAC 225111 >seq21518 Length=5902 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 4170 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 4117 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| |||||| ||| Sbjct 4116 AGTATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 4057 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 4056 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 3997 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| |||||||| |||| Sbjct 3996 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 3948 >seq19539 Length=19330 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| |||| ||| |||| ||||| Sbjct 17472 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 17525 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | |||||| |||||| ||| Sbjct 17526 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 17585 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | ||||||||||||||||||||| Sbjct 17586 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 17645 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||||| ||||||||| |||||||| |||| Sbjct 17646 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 17694 >seq20709 Length=307029 Score = 158 bits (174), Expect = 2e-32 Identities = 173/229 (76%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| | ||| ||| |||| ||||| Sbjct 39716 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 39769 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | ||||| |||||| ||| Sbjct 39770 AGCATCATGAACTCTTTCGTCAACGACATCTTCGAGAGAATCGGTGGAGAGGCCTCCCGC 39829 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | |||||||||||||| |||||| Sbjct 39830 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 39889 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||| | |||||||| || |||||||||| Sbjct 39890 CTCCTGCTGCCCGGAGAGCTGGCTAAACACGCCGTGTCTGAGGGCACCA 39938 Score = 129 bits (142), Expect = 8e-24 Identities = 169/231 (73%), Gaps = 10/231 (4%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| |||||||| |||||| |||| | ||| ||| |||| ||||| Sbjct 27405 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 27458 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| | || || |||||| ||| Sbjct 27459 AGCATCATGAACTCTTTCGTCAACGACATCTTCGAGAGAATTGGTGGAGAGGCCTCCCGC 27518 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | | | |||||||||||||| |||||| Sbjct 27519 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 27578 Query 725094 CTGATCATG--CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | || | ||| || | | | |||||||| || |||||||||| Sbjct 27579 CTCCTGCTGCCCCCGGAGAGTT--CTAAACACGCCGTGTCTGAGGGCACCA 27627 >seq8638 Length=602592 Score = 104 bits (114), Expect = 3e-16 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017 ||||| | | ||||| || |||||||| || || || ||| || |||| | || | Sbjct 45803 CTCCAGCCGGGCCATGAGCATTATGAACTCCTTCGTGAATGACCTGTTCGAGAGGATTGC 45862 Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 ||| || || || | |||| | |||||||||| ||| ||| || | ||| | Sbjct 45863 CACAGAAGCGTCCCGTTTAGCGCAGTACAACAAGCGCTCCACCATCACCAGCAGAGAGGT 45922 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 ||||| || ||||||||| || ||| ||| |||||||||| |||||||| |||||||| Sbjct 45923 GCAGACTGCGGTGCGCCTGCTCCTGCCCGGGGAACTGGCCAAACACGCCGTGTCCGAGGG 45982 Query 725138 CACCA 725142 ||||| Sbjct 45983 CACCA 45987 >seq23817 Length=240738 Score = 98.7 bits (108), Expect = 1e-14 Identities = 159/229 (69%), Gaps = 16/229 (7%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| | |||||| || ||| |||| ||||| |||||| Sbjct 176389 TACAAGGTGCTGACGCAGGTCCAACCCGATACCG-----CCATC----------TCCATG 176433 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| ||| |||||| ||| | || |||| ||| |||||| ||| Sbjct 176434 AGCATCATGAACTC-TTTCTCAACGGCATCTTTGAGTGCATTGGCTGAGAGGCCTCCCGC 176492 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| || || |||||||| | ||| ||| | | | |||||| | ||| | ||| || Sbjct 176493 CTGGAGCACTACAACAAGCTCTCCACCATCACCTCCAGGGAGATCAACACCACTGTGTGC 176552 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| ||| || ||||| | ||||| | | ||||||||||||| Sbjct 176553 CTCCTGCTGCCCGGAGAGCTGGCTAAGCACGTCTTGTCCGAGGGCACCA 176601 >seq20084 Length=15297 Score = 86.0 bits (94), Expect = 9e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| ||| ||||||| || | | ||||| || | || || || ||||||||||| Sbjct 13228 CGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTATGGATTCCAGATCGCA 13169 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || |||||||||||||| | ||| || || ||||||||||| |||||||| Sbjct 13168 ATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTATATCAAGGAC 13112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175297665101720