Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq23633 194 2e-43
seq23540 190 3e-42
seq22736 190 3e-42
seq1952 190 3e-42
seq23769 188 1e-41
seq17191 188 1e-41
seq23118 185 1e-40
seq21518 176 6e-38
seq19539 176 6e-38
seq20709 158 2e-32
seq8638 104 3e-16
seq23817 98.7 1e-14
seq20084 86.0 9e-11
>seq23633
Length=2564
Score = 194 bits (214), Expect = 2e-43
Identities = 181/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 1797 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 1850
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 1851 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1910
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 1911 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1970
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 1971 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 2019
>seq23540
Length=2231
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 591 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 538
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 537 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 478
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 477 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 418
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 417 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 371
>seq22736
Length=8147
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 5822 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 5769
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 5768 AGCATCATGAACTCATTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 5709
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 5708 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 5649
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 5648 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 5602
>seq1952
Length=121728
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 2095 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 2042
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 2041 AGCATCATGAACTCATTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 1982
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 1981 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 1922
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 1921 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 1875
>seq23769
Length=2378
Score = 188 bits (208), Expect = 1e-41
Identities = 180/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 510 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 563
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 564 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 623
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 624 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 683
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||| ||||
Sbjct 684 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 732
>seq17191
Length=53944
Score = 188 bits (208), Expect = 1e-41
Identities = 180/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 8976 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 8923
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 8922 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 8863
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 8862 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 8803
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||| ||||
Sbjct 8802 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 8754
>seq23118
Length=227226
Score = 185 bits (204), Expect = 1e-40
Identities = 178/227 (78%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
|||||||||||||||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 225331 TACAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 225278
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| |||||||||||||| | || ||||||||| |||||| |||
Sbjct 225277 AGCATCATGAACTCTTTTGTCAACGACATCTTTGAGCGCATCGGCGGAGAGGCCTCCCGC 225218
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 225217 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 225158
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| |||||||| |||||||||||
Sbjct 225157 CTCCTGCTGCCCGGAGAGCTGGCCAAACACGCCGTGTCCGAGGGCAC 225111
>seq21518
Length=5902
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 4170 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 4117
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| |||||| |||
Sbjct 4116 AGTATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 4057
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 4056 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 3997
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||| ||||
Sbjct 3996 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 3948
>seq19539
Length=19330
Score = 176 bits (194), Expect = 6e-38
Identities = 177/229 (77%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 17472 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 17525
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | |||||| |||||| |||
Sbjct 17526 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGAGGATCGGCGGAGAGGCCTCCCGC 17585
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 17586 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 17645
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||| ||||
Sbjct 17646 CTCCTGCTGCCCGGAGAGCTGGCCAAGCACGCCGTGTCCGAGGGAACCA 17694
>seq20709
Length=307029
Score = 158 bits (174), Expect = 2e-32
Identities = 173/229 (76%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| | ||| ||| |||| |||||
Sbjct 39716 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 39769
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | ||||| |||||| |||
Sbjct 39770 AGCATCATGAACTCTTTCGTCAACGACATCTTCGAGAGAATCGGTGGAGAGGCCTCCCGC 39829
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||| ||||||
Sbjct 39830 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 39889
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||| | |||||||| || ||||||||||
Sbjct 39890 CTCCTGCTGCCCGGAGAGCTGGCTAAACACGCCGTGTCTGAGGGCACCA 39938
Score = 129 bits (142), Expect = 8e-24
Identities = 169/231 (73%), Gaps = 10/231 (4%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| | ||| ||| |||| |||||
Sbjct 27405 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCCAAGGCCATG 27458
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| || ||||||||||| |||| | || || |||||| |||
Sbjct 27459 AGCATCATGAACTCTTTCGTCAACGACATCTTCGAGAGAATTGGTGGAGAGGCCTCCCGC 27518
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||||| || |||||||||| ||| ||| | | | |||||||||||||| ||||||
Sbjct 27519 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCTGTGCGC 27578
Query 725094 CTGATCATG--CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || | ||| || | | | |||||||| || ||||||||||
Sbjct 27579 CTCCTGCTGCCCCCGGAGAGTT--CTAAACACGCCGTGTCTGAGGGCACCA 27627
>seq8638
Length=602592
Score = 104 bits (114), Expect = 3e-16
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 724958 CTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGG 725017
||||| | | ||||| || |||||||| || || || ||| || |||| | || |
Sbjct 45803 CTCCAGCCGGGCCATGAGCATTATGAACTCCTTCGTGAATGACCTGTTCGAGAGGATTGC 45862
Query 725018 CACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077
||| || || || | |||| | |||||||||| ||| ||| || | ||| |
Sbjct 45863 CACAGAAGCGTCCCGTTTAGCGCAGTACAACAAGCGCTCCACCATCACCAGCAGAGAGGT 45922
Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137
||||| || ||||||||| || ||| ||| |||||||||| |||||||| ||||||||
Sbjct 45923 GCAGACTGCGGTGCGCCTGCTCCTGCCCGGGGAACTGGCCAAACACGCCGTGTCCGAGGG 45982
Query 725138 CACCA 725142
|||||
Sbjct 45983 CACCA 45987
>seq23817
Length=240738
Score = 98.7 bits (108), Expect = 1e-14
Identities = 159/229 (69%), Gaps = 16/229 (7%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| | |||||| || ||| |||| ||||| ||||||
Sbjct 176389 TACAAGGTGCTGACGCAGGTCCAACCCGATACCG-----CCATC----------TCCATG 176433
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
||||||||||| ||| |||||| ||| | || |||| ||| |||||| |||
Sbjct 176434 AGCATCATGAACTC-TTTCTCAACGGCATCTTTGAGTGCATTGGCTGAGAGGCCTCCCGC 176492
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
|||| || || |||||||| | ||| ||| | | | |||||| | ||| | ||| ||
Sbjct 176493 CTGGAGCACTACAACAAGCTCTCCACCATCACCTCCAGGGAGATCAACACCACTGTGTGC 176552
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||| | ||||| | | |||||||||||||
Sbjct 176553 CTCCTGCTGCCCGGAGAGCTGGCTAAGCACGTCTTGTCCGAGGGCACCA 176601
>seq20084
Length=15297
Score = 86.0 bits (94), Expect = 9e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| ||| ||||||| || | | ||||| || | || || || |||||||||||
Sbjct 13228 CGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTATGGATTCCAGATCGCA 13169
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || |||||||||||||| | ||| || || ||||||||||| ||||||||
Sbjct 13168 ATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTATATCAAGGAC 13112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7175297665101720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |