Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq21827 610 8e-170 seq25415 596 2e-165 >seq21827 Length=6214 Score = 610 bits (676), Expect = 8e-170 Identities = 732/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734 |||||| | ||| ||||| || | |||||| | || |||| ||||| ||||| | Sbjct 5030 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 5089 Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793 |||||| ||||| || | | |||||| ||||| || || |||| ||| | ||||| | Sbjct 5090 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148 Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853 | || || || ||||| || || || ||||| ||| |||| || || | ||||| |||| Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208 Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913 | || || |||||||| || |||||| ||| || || ||| | || || ||||| | Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGA 5268 Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973 | |||||||| || || |||| || ||| | || || |||||||||| | || | | Sbjct 5269 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 5328 Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033 | | ||||| | | || | | |||||||| |||||||||||||| || || Sbjct 5329 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 5388 Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093 || | ||||||||||| ||||| ||| |||||||| ||||| || || || || | || Sbjct 5389 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 5448 Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153 | || ||| | ||||||| | |||||||| || || || | ||||||||| || | Sbjct 5449 CTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAA 5508 Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213 ||||||||||||| |||| |||| ||||||||||||| || ||||||||||||||||||| Sbjct 5509 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 5568 Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273 | || || ||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 5569 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 5628 Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332 | | || ||||| | | | || | ||||| || |||| || || || | Sbjct 5629 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 5687 Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392 ||||| | ||||||||||| ||||| |||||||| ||||| || || ||||| || || Sbjct 5688 GGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTT 5747 Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452 || || |||||||||||||| ||| ||||||||||| ||||| || ||||||||||| Sbjct 5748 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTA 5807 Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 158512 ||||| |||||||| || || || |||||||| || | || | || ||||| || Sbjct 5808 GCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTT 5867 Query 158513 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 158572 ||| | || |||||||| |||||||| || | ||||| |||| |||||||| | || Sbjct 5868 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 5927 Query 158573 ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 158632 |||||||| ||| | | ||||| ||| | |||||||||||||||||||| |||||| Sbjct 5928 ACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAAC 5987 Query 158633 GCACACAACTTCCCACTGGATCTTGCTGC 158661 || || |||||||| || ||||| ||||| Sbjct 5988 GCTCATAACTTCCCTCTAGATCTAGCTGC 6016 >seq25415 Length=1491 Score = 596 bits (660), Expect = 2e-165 Identities = 748/1018 (73%), Gaps = 10/1018 (1%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || || || || ||||| |||||||| || Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| ||| ||| | ||| | || |||||| |||| || || || ||| Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557 | || ||||| ||||| || | || |||||||| | ||||| ||| || || | Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544 Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617 || || || || || || |||||| || | | | || ||| | | |||| ||||| Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604 Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677 ||||| | ||||| || || || ||||| ||| | || || | ||| | ||||| Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664 Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737 |||||| ||||| || |||| || |||||||| ||| |||| ||||||||| ||||||| Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724 Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796 ||| ||| | || ||||| ||||| || || ||||| ||||| ||||| ||||||| Sbjct 725 ATCT-GTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783 Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856 | |||||||| || ||||| || ||||||||| ||||||||||| || ||||| | Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843 Query 159857 GGGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCC 159913 | ||||| || || ||| ||| |||| || |||| ||||||| || || ||||| Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACAT 900 Query 159914 TCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAA 159973 | ||||| || |||||||||||||||||||| || | || | || ||| | || || | Sbjct 901 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTA 960 Query 159974 TCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTA 160033 | ||||||||||| ||||| || || || ||||||||||| || ||||| ||||| Sbjct 961 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 1020 Query 160034 AGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCT 160093 ||| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| | Sbjct 1021 GGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTT 1080 Query 160094 GGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGT 160153 |||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| | Sbjct 1081 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 1140 Query 160154 TTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACC 160213 |||| || || | ||| |||||| || |||| | | ||||| || | || | Sbjct 1141 TTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATC 1200 Query 160214 TTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGA 160273 | ||||| || || ||||| |||||| || | ||||| |||||||| |||||||||| Sbjct 1201 TACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGA 1260 Query 160274 CCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTG 160333 | ||||||||||| || || || || || ||||| |||||||||||||||| || | Sbjct 1261 CTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 1320 Query 160334 ATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 |||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| || Sbjct 1321 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572837337432000