Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 610 8e-170
seq25415 596 2e-165
>seq21827
Length=6214
Score = 610 bits (676), Expect = 8e-170
Identities = 732/989 (74%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 157675 CTTCTGCGAGTGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACT 157734
|||||| | ||| ||||| || | |||||| | || |||| ||||| ||||| |
Sbjct 5030 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 5089
Query 157735 GATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 157793
|||||| ||||| || | | |||||| ||||| || || |||| ||| | ||||| |
Sbjct 5090 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 157794 CCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 157853
| || || || ||||| || || || ||||| ||| |||| || || | ||||| ||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 157854 ACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCA 157913
| || || |||||||| || |||||| ||| || || ||| | || || ||||| |
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGA 5268
Query 157914 TCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAG 157973
| |||||||| || || |||| || ||| | || || |||||||||| | || | |
Sbjct 5269 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 5328
Query 157974 TATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACC 158033
| | ||||| | | || | | |||||||| |||||||||||||| || ||
Sbjct 5329 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 5388
Query 158034 GTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTG 158093
|| | ||||||||||| ||||| ||| |||||||| ||||| || || || || | ||
Sbjct 5389 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 5448
Query 158094 CAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 158153
| || ||| | ||||||| | |||||||| || || || | ||||||||| || |
Sbjct 5449 CTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAA 5508
Query 158154 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACC 158213
||||||||||||| |||| |||| ||||||||||||| || |||||||||||||||||||
Sbjct 5509 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 5568
Query 158214 CGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 158273
| || || ||| | || || ||||| |||||||| || || || ||| |||||||||||
Sbjct 5569 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 5628
Query 158274 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 158332
| | || ||||| | | | || | ||||| || |||| || || || |
Sbjct 5629 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 5687
Query 158333 GGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTC 158392
||||| | ||||||||||| ||||| |||||||| ||||| || || ||||| || ||
Sbjct 5688 GGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTT 5747
Query 158393 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTT 158452
|| || |||||||||||||| ||| ||||||||||| ||||| || |||||||||||
Sbjct 5748 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTA 5807
Query 158453 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTC 158512
||||| |||||||| || || || |||||||| || | || | || ||||| ||
Sbjct 5808 GCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTT 5867
Query 158513 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 158572
||| | || |||||||| |||||||| || | ||||| |||| |||||||| | ||
Sbjct 5868 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 5927
Query 158573 ACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAAC 158632
|||||||| ||| | | ||||| ||| | |||||||||||||||||||| ||||||
Sbjct 5928 ACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAAC 5987
Query 158633 GCACACAACTTCCCACTGGATCTTGCTGC 158661
|| || |||||||| || ||||| |||||
Sbjct 5988 GCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 596 bits (660), Expect = 2e-165
Identities = 748/1018 (73%), Gaps = 10/1018 (1%)
Strand=Plus/Plus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || || || || ||||| |||||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | ||| | || |||||| |||| || || || |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557
| || ||||| ||||| || | || |||||||| | ||||| ||| || || |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544
Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617
|| || || || || || |||||| || | | | || ||| | | |||| |||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604
Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677
||||| | ||||| || || || ||||| ||| | || || | ||| | |||||
Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664
Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737
|||||| ||||| || |||| || |||||||| ||| |||| ||||||||| |||||||
Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724
Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796
||| ||| | || ||||| ||||| || || ||||| ||||| ||||| |||||||
Sbjct 725 ATCT-GTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783
Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856
| |||||||| || ||||| || ||||||||| ||||||||||| || ||||| |
Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843
Query 159857 GGGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCC 159913
| ||||| || || ||| ||| |||| || |||| ||||||| || || |||||
Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACAT 900
Query 159914 TCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAA 159973
| ||||| || |||||||||||||||||||| || | || | || ||| | || || |
Sbjct 901 TGAACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTA 960
Query 159974 TCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTA 160033
| ||||||||||| ||||| || || || ||||||||||| || ||||| |||||
Sbjct 961 TTCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 1020
Query 160034 AGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCT 160093
||| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| |
Sbjct 1021 GGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTT 1080
Query 160094 GGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGT 160153
|||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |
Sbjct 1081 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 1140
Query 160154 TTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACC 160213
|||| || || | ||| |||||| || |||| | | ||||| || | || |
Sbjct 1141 TTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATC 1200
Query 160214 TTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGA 160273
| ||||| || || ||||| |||||| || | ||||| |||||||| ||||||||||
Sbjct 1201 TACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGA 1260
Query 160274 CCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTG 160333
| ||||||||||| || || || || || ||||| |||||||||||||||| || |
Sbjct 1261 CTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 1320
Query 160334 ATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391
|||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| ||
Sbjct 1321 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572837337432000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |