Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 605 3e-168
seq25415 500 1e-136
>seq21827
Length=6214
Score = 605 bits (670), Expect = 3e-168
Identities = 714/961 (74%), Gaps = 4/961 (0%)
Strand=Plus/Plus
Query 159987 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 160046
||||| || || | || ||||| || || ||||||| || || | ||| | |||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 160047 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 160105
||||| || || |||| ||| | ||||| || || || || || || || || |||||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 160106 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 160165
||| || |||| || || | ||||| ||||| || || |||||||| || |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 160166 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 160225
||| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 160226 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATCTATGC 160285
| | || || |||||||||| | || | || | ||||| | | || | |
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356
Query 160286 ATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 160345
|||||||| ||||||||||||||| | |||| | ||||||||||| ||||| |||
Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416
Query 160346 AGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGGTCA 160405
|||||||| ||||| || || || || ||||||| ||| | | ||||| | |||||
Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476
Query 160406 AGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGT 160465
||| || || || | ||||||||| || |||||||||||||| |||| |||| ||||
Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536
Query 160466 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 160525
||||||||| || ||||| ||||||||||| || || |||||| | ||||| ||||| ||
Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596
Query 160526 ATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGTTC- 160584
|||||| || || | ||| ||||||||| || | || ||||| | | | ||
Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTC-TAGTTTGATCA 5655
Query 160585 GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAGAGA 160644
| ||||| || |||| || || || | ||||| | ||||||||||||||||| |
Sbjct 5656 GGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAA 5715
Query 160645 CCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 160704
||||||| ||||| || || |||||||| || || || ||||||||||||||||| |
Sbjct 5716 CCTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTT 5775
Query 160705 TCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGT 160764
|||||||||| ||||| | ||||||||||| || || ||||||||||| || || ||||
Sbjct 5776 TCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGT 5835
Query 160765 TCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGT 160824
|||||||| | ||| ||||||| ||||| || ||| | || |||||||| |||||||| |
Sbjct 5836 TCACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAAT 5895
Query 160825 CCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTGCTG 160884
| | | ||| |||||||||||||| | || |||||||| || | | || ||||||
Sbjct 5896 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTA 5955
Query 160885 GTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCGCTG 160944
| |||||||||||||||||||| |||||||| || |||||||| || || || ||||
Sbjct 5956 ACTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTG 6015
Query 160945 C 160945
|
Sbjct 6016 C 6016
>seq25415
Length=1491
Score = 500 bits (554), Expect = 1e-136
Identities = 726/1020 (71%), Gaps = 4/1020 (0%)
Strand=Plus/Plus
Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747
||||| || | || |||||| | |||| |||||||||||||| || ||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807
|| | || |||| ||| ||| | || | || |||||| |||| || ||||| ||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTTCT 161866
| ||| |||||||||||||| | || ||||||||| | | ||| ||| ||||| |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTT 544
Query 161867 TACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGG 161925
|| || ||||| ||||| ||| | | | | || ||| || || || || ||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCT-TTGTTGTTACTATGGG 603
Query 161926 GTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTTG 161985
| ||||| || ||||| ||||| || ||| ||| | || || || |||| |||||
Sbjct 604 GCCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTG 663
Query 161986 TGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCAC 162045
| || || || || || |||| ||||| || |||||| | ||||| |||||||| || |
Sbjct 664 TTGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 723
Query 162046 GTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 162105
| | || | || || || ||||| || || ||||| ||||| ||||| |||||||
Sbjct 724 GATCTGTTCAATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783
Query 162106 TCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 162165
| || ||||| || || || | |||||||| ||||||| || || || ||||
Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843
Query 162166 GGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTGA 162225
| || || || || ||| ||||| | | ||| | ||||| || ||||| ||||| |||
Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 903
Query 162226 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTC 162285
|||| || |||||||||||||||||||| || | || | || || |||| |||||||
Sbjct 904 ACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTC 963
Query 162286 ACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGG 162345
| || | || || |||||||| |||| || ||||| || ||||| || || ||
Sbjct 964 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGG 1023
Query 162346 CGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 162405
| ||| | | || || | ||||| |||||||| |||||||| || |||||||| ||||
Sbjct 1024 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 1083
Query 162406 CGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 162465
| || ||||| || |||| ||||| || || || ||| | ||||| || ||||| ||||
Sbjct 1084 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 1143
Query 162466 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTC 162525
| || || | ||| |||||| || |||| | | ||||| || || || || |
Sbjct 1144 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTAC 1203
Query 162526 GTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGT 162585
|||| || || ||||| |||||| ||| | ||||| |||||||| || ||||| || |
Sbjct 1204 GTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTT 1263
Query 162586 TCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACC 162645
||||||| || || ||||| | || ||||| | ||||| ||| | || || || |
Sbjct 1264 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1323
Query 162646 AACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705
| || ||||| ||| |||| ||||| || || ||||| || | || ||||| |||||||
Sbjct 1324 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 1383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559321741572000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |