Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq21827 583 1e-161 seq25415 506 3e-138 >seq21827 Length=6214 Score = 583 bits (646), Expect = 1e-161 Identities = 707/960 (74%), Gaps = 2/960 (0%) Strand=Plus/Plus Query 181008 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 181067 ||||| || || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117 Query 181068 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 181126 ||||| || || |||| ||| | ||||| || || || || || || || || ||||| Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176 Query 181127 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 181186 ||| || |||| || || | ||||| ||||| || || |||||||| || |||| | Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236 Query 181187 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 181246 ||| || || ||| | || || || || || |||||||| || || ||||||| || Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296 Query 181247 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATTTATGC 181306 | | || || |||||||||| | || | || | ||||| | | || | | Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356 Query 181307 ATACATGGGACGTGAATGGGAACTCTCTTACCGCTTAGGTATGCGCCCCTGGATCTGTGT 181366 || ||||| ||||| |||||||| || ||| | ||||||||||| ||||| ||| Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416 Query 181367 TGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGGTCA 181426 |||||| || ||||| || ||||| || ||||||| ||| | ||||||| | ||||| Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476 Query 181427 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 181486 ||| || ||||||| ||||| || || ||||||||||| ||||||| |||| |||| Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536 Query 181487 TTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGT 181546 |||||||| ||||||||||| || ||||| || || |||||||| || || || ||||| Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596 Query 181547 ATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 181606 ||| || || || || |||||||| ||||| ||||| ||||| || ||| | || | Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5656 Query 181607 TGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGAC 181666 || || || |||| ||| || || | ||||||| ||||| ||||| ||||| || Sbjct 5657 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 5716 Query 181667 ATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATT 181726 ||||| ||||| || || || ||||| ||||| || |||||||||||||||||| || Sbjct 5717 CTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5776 Query 181727 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 181786 ||||||||| ||||| | ||||||||||| || || ||||||||||| || || ||||| Sbjct 5777 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTT 5836 Query 181787 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 181846 ||| || | || | ||||| ||||| |||||| | ||||| ||||| |||||||| || Sbjct 5837 CACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATC 5896 Query 181847 TATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGCCGG 181906 | | | || | ||||| ||||| | || |||||||| || | |||||||||| Sbjct 5897 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAA 5956 Query 181907 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 181966 | || |||||||| ||||| || || ||||| || |||||||| || ||||| || || Sbjct 5957 CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016 >seq25415 Length=1491 Score = 506 bits (560), Expect = 3e-138 Identities = 722/1008 (72%), Gaps = 10/1008 (1%) Strand=Plus/Plus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 |||| |||||| | |||| || || || ||||| |||||||| || || | || Sbjct 376 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 435 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||| ||| | ||| | || |||||| |||| || ||| | ||||| || | Sbjct 436 TTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCAT 495 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCT 182549 |||| ||||| || | || ||||||| | ||||| ||| ||||| | || || || Sbjct 496 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 554 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || || || |||||| || | | | || ||| | | |||| ||||| ||||| | Sbjct 555 GTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCA 614 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || || |||| || ||||| ||| | || || || |||| ||| || ||||| ||| Sbjct 615 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCAC 674 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCG-CCTGATTGG 182728 || || |||| || || ||||||||| | | ||||||||||||||||| ||| || Sbjct 675 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCA 733 Query 182729 AATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 | | ||||||| ||||| || || || || ||||| ||||| || || || ||| || Sbjct 734 ATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATT 793 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 ||| || ||||| | || ||||| |||||| || ||||| |||||||| ||||| Sbjct 794 CCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGC 853 Query 182849 GATCTTCAGGT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTT 182905 || || | | |||| || |||| ||||||| || || |||||| | ||||| || Sbjct 854 TATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATTGAACCCATT 910 Query 182906 CCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGT 182965 |||||||||||||||||||| || |||| | || ||||| | ||||| ||||||| Sbjct 911 TCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGC 970 Query 182966 CACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGA 183025 || ||||| ||||| || | ||||||||| || ||||| ||||| || || | Sbjct 971 TACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAA 1030 Query 183026 TTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAAT 183085 | ||||| | || || || ||||| ||||| || || || || |||||||| ||||| Sbjct 1031 CCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAAT 1090 Query 183086 CTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGT 183145 ||| |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 1091 CTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGT 1150 Query 183146 CATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTA 183205 | ||| | ||| | | || |||| | | || || || || ||||| ||||| || Sbjct 1151 AACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTA 1210 Query 183206 TGATTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACAC 183265 ||| || || ||| || || | ||||| |||||||| || || ||||| |||||||| Sbjct 1211 TGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACAC 1270 Query 183266 AAAGAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACA 183325 || || || || | || ||||| | ||||||||| |||| || ||||| || || Sbjct 1271 CAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCA 1330 Query 183326 TGAAAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||||||| | || |||||||| || |||||||| | || ||||| || Sbjct 1331 TGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614417388316800