Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_026928.1
Length=189418
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 583 1e-161
seq25415 477 1e-129
>seq21827
Length=6214
Score = 583 bits (646), Expect = 1e-161
Identities = 707/960 (74%), Gaps = 2/960 (0%)
Strand=Plus/Plus
Query 177876 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 177935
||||| || || | || ||||| || || ||||||| || || | ||| | ||||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 177936 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 177994
||||| || || |||| ||| | ||||| || || || || || || || || |||||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 177995 ACCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATC 178054
||| || |||| || || | ||||| ||||| || || |||||||| || |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 178055 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 178114
||| || || ||| | || || || || || |||||||| || || ||||||| ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 178115 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATCTATGC 178174
| | || || |||||||||| | || | || | ||||| | ||||| | |
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356
Query 178175 ATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGT 178234
|| ||||| ||||||||||||||| | |||| | ||||||||||| ||||| |||
Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416
Query 178235 AGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGGTCA 178294
||||| || ||||| || ||||| || | || || ||| || ||||||| | |||||
Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476
Query 178295 AGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCTTGT 178354
||| |||||||||| ||||| || || ||||||||||| ||||||| |||| ||||
Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536
Query 178355 TTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGGTGT 178414
|||||||| || |||||||| || |||||||| || |||||||| || || || |||||
Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596
Query 178415 ATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTTCG 178474
|||||| || || || |||||||| ||||| ||||| ||||| || ||| | | |
Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5656
Query 178475 TGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGAC 178534
||||| || |||| ||||| || | ||||| | ||||| ||||| ||||| ||
Sbjct 5657 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 5716
Query 178535 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATT 178594
||||| ||||| || || ||||| || || || || |||||||||||||||||| ||
Sbjct 5717 CTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5776
Query 178595 CAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTT 178654
||||||||| ||||| | ||||||||||| || || ||||||||||| || || |||||
Sbjct 5777 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTT 5836
Query 178655 CACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTC 178714
||| || | || | ||||| ||||| |||||| | ||||| ||||| |||||||| ||
Sbjct 5837 CACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATC 5896
Query 178715 CATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGG 178774
| | || | ||||| ||||| | || || ||||| || | ||||||||||
Sbjct 5897 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAA 5956
Query 178775 TCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGCAGC 178834
| || |||||||| ||||| || || ||||| || |||||||| || ||||| || ||
Sbjct 5957 CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 477 bits (528), Expect = 1e-129
Identities = 703/990 (71%), Gaps = 4/990 (0%)
Strand=Plus/Plus
Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292
|||| |||||| | |||| || || || ||||| |||||||| || || | ||
Sbjct 376 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 435
Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352
|||| ||| ||| | ||| | || |||||| |||| || ||| | ||||| || |
Sbjct 436 TTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCAT 495
Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGG-TGCTAACTTTCTTACGGCAGCT 179411
|||| ||||| || | || ||||||||| | || || ||| ||||| | || || ||
Sbjct 496 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 554
Query 179412 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179471
|| || || |||||| || | | | || ||| | | |||| ||||| ||||| |
Sbjct 555 GTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCA 614
Query 179472 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 179531
|| || |||| || ||||| ||| | || || || |||| ||| || ||||| |||
Sbjct 615 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCAC 674
Query 179532 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 179590
|| || |||| || || ||||||||| | | ||||||||||||||||| ||| |
Sbjct 675 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 734
Query 179591 TATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTT 179650
| | ||||||| ||||| || || || || ||||| ||||| || || || ||| ||
Sbjct 735 TTAC-GACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATT 793
Query 179651 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 179710
||| || ||||| | || ||||| |||||| || ||||| |||||||| |||||
Sbjct 794 CCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGC 853
Query 179711 GATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCA 179770
|| || | ||| | || || | || || || || || ||||| | ||||| || ||
Sbjct 854 TATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 913
Query 179771 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTAC 179830
|||||||||||||||||| || | || | || ||||| | ||||| ||||| | |||
Sbjct 914 TATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTAC 973
Query 179831 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTC 179890
||||| ||||| || | ||||||||| || |||||||| || ||| ||| | |
Sbjct 974 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCC 1033
Query 179891 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 179950
|| || | ||||| |||||||| |||||||| || |||||||| ||||| || |||||
Sbjct 1034 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 1093
Query 179951 CGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 180010
|| |||| ||||| || || || ||| | ||||| || ||||| ||||| || || |
Sbjct 1094 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 1153
Query 180011 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 180070
||| |||||| || |||| | | ||||| || || || || ||||| || ||
Sbjct 1154 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGA 1213
Query 180071 TTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAA 180130
||||| |||||| ||| | ||||| |||||||| || |||||||| |||||||||||
Sbjct 1214 CTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAA 1273
Query 180131 GAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGA 180190
|| ||||| | || ||||| | ||||| ||| |||| | ||||| || |||||
Sbjct 1274 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1333
Query 180191 GTCATTCGTATTCCCAGAAGAAGTTCTGCC 180220
| ||||||| || || ||||| ||
Sbjct 1334 AAACCTTATATTCCCTGAGGAGGTTCTACC 1363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605812192372800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |