Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 720 0.0
seq22773 136 5e-27
seq19222 132 7e-26
>seq18889
Length=1054283
Score = 720 bits (798), Expect = 0.0
Identities = 1342/1956 (69%), Gaps = 27/1956 (1%)
Strand=Plus/Plus
Query 68651 TATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGAT 68710
||||||| ||||| || ||||||| | || |||| | | || ||||| || |
Sbjct 963991 TATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTTAGGTCCTTCAGCAGATGTGGGT 964050
Query 68711 TAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTT 68770
| || || ||||| || ||||| | ||||| || ||||| || || ||||| || | ||
Sbjct 964051 TTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 964110
Query 68771 CCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCA 68830
| | || ||||| || || || ||||| || || || || || |||||||| |||| ||
Sbjct 964111 CGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAACA 964170
Query 68831 ATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAA 68890
| | || || || | ||| ||| | || || || || || | ||||| ||||| |
Sbjct 964171 ACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 964230
Query 68891 GATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATC 68950
| |||| || || | ||| | |||||||| ||||| || |||| | || |
Sbjct 964231 GCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTCACTGGGGAGC 964290
Query 68951 CATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCAC 69010
| ||||| |||||||| || |||| ||| || | || || |||||||| | |||
Sbjct 964291 CTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCCAGGGCAG 964350
Query 69011 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATG 69070
| || || || ||||| || |||| |||| || || ||||| ||| || ||||
Sbjct 964351 CATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGAACTTTCAAATG 964410
Query 69071 GATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTAT 69130
||||| | | || || || |||||||| | ||||| || || || || || || || |
Sbjct 964411 GATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCAATTGGCCTGT 964470
Query 69131 GTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 69190
| | ||| |||||| | || ||||| |||| || || || ||||| || || || ||||
Sbjct 964471 GGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATGATCTTAT 964530
Query 69191 TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGTCCAT 69250
| ||||||| || | ||||||| || || || |||||||| | |
Sbjct 964531 TGAGATTTCTTACAATTACTTTAGTGACTGAGGCAAGCTTTTTGAAATCAAAGGTGCGTT 964590
Query 69251 CTA---TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAG 69307
|| ||||| |||| || || || | || || | ||||| || ||||| ||||
Sbjct 964591 CTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTACAGACGGCTACTTCATCTT 964650
Query 69308 AATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTT 69367
||| ||| | | ||||| || || | ||||| |||||||| || |||| ||| |
Sbjct 964651 TGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCT 964710
Query 69368 GCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAA 69427
|||| |||||||| |||||||||| || ||||| | || | || || || |||||
Sbjct 964711 GCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTG 964770
Query 69428 TCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCT 69487
||||||| || || || | | ||| || | ||| || | || ||| || ||
Sbjct 964771 TCTGAGACTCTATGATGGCATACCACACCTGCTGAGCCTTGACCACCCGCTTC--ACTCT 964828
Query 69488 TCTCT--TTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAA 69545
| || | ||||||| |||| || ||| || || || || |||||| ||||||||
Sbjct 964829 ACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAA 964888
Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCAT 69605
||||| || ||| | ||||||||||| ||||| | | | | | |||| |||||
Sbjct 964889 CCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCAT 964948
Query 69606 AAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664
|| || || || ||||| || || ||| ||||| |||| | || | || || || |
Sbjct 964949 GAACAGGTCAGGGATCCATAGGGC-ATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTAC 965007
Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724
| || || || || || || ||||| || | | |||| | |||||||| || | || |
Sbjct 965008 CAGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAA 965067
Query 69725 TCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTAT 69784
| || | | | |||||||||||||| || || || || | || | |||||||| || |
Sbjct 965068 TGGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGT 965127
Query 69785 AGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTC 69844
| |||||||||||||| | || |||||| || |||||||||||||||| ||| |||||||
Sbjct 965128 ACACTCTCAGCATCGGCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTC 965187
Query 69845 CTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAG 69904
|| ||| | |||| |||| | || ||| || |||||||| ||||||||| ||||
Sbjct 965188 CTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAG 965247
Query 69905 CACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAA 69964
|||| |||||| ||||||||| || || || ||||| ||||| ||||| || || |
Sbjct 965248 CACATTGTTTCAGTGTGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGA 965307
Query 69965 AACAGCTAGACATTTGATG-ATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGA 70023
| ||||| || | || | ||| |||| || || || || | || ||||| || |||
Sbjct 965308 AGCAGCTGGAGAGCTGGGGTCTGT-TAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGA 965366
Query 70024 GTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGA 70083
|||||||| || ||||| ||||| ||||| || ||||| |||| |||||||| | |
Sbjct 965367 GTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGAGTTG 965426
Query 70084 TGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTT 70143
|| ||||| | || || | ||| | ||| ||||| || || || || |||| |||
Sbjct 965427 TGGATTCCGACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTG 965486
Query 70144 ATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCT 70203
||||||| || ||| || || || |||||||| ||||| | ||||| ||||| ||
Sbjct 965487 ATTTTCAGCAAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCC 965546
Query 70204 CTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTA--ACTATATCCA--- 70258
|| || ||||| ||| |||| || || || | | |||| | || | ||| |
Sbjct 965547 CTATCATAAATTATAGCAGAGTTGAGGCGGTC--TTTGTTTGCAAGGACAAGATCTAGGG 965604
Query 70259 TAACAGTAGGTGAGATAATCGGAGA---TCGTTTACCATTTTTAGGATTAACATAGTTGA 70315
| | | || ||||| || || || || || |||| |||||| ||||||| ||
Sbjct 965605 TGTC--TTGG-GAGATCATGGGGGAGTGGCGCTT---ATTTAAAGGATTGACATAGTGGA 965658
Query 70316 ATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGG 70375
| | ||| ||||| || ||||| || | || || || || || || | |||||| | |
Sbjct 965659 ACAGATCCTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGATTTGACACAG 965718
Query 70376 CTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTT 70435
| |||| || || || || ||||| || || || | || || || || || || |
Sbjct 965719 CAATTCGTGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCT 965778
Query 70436 CCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTT 70495
| ||||| | || || | || | ||| || |||||| | || || ||||| || || |
Sbjct 965779 CTGCAGCAAGTGTGTCCAGCTCCACAGTGGTCACTCCGCTGTACAGACCTTGGATCACCT 965838
Query 70496 TCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACATAATTTTCTAA 70555
|||| | |||| | || || | || || | || || |||||||| | || |
Sbjct 965839 TCATCGTGATTTGTGTGGGGTCCACAAACTCCGCATTGAGCCCATAACAGAGCTTCTGGA 965898
Query 70556 TACGAGATGTAATTTTATCAAACATAACATTCTCCT 70591
| ||||| || |||||||||||||| || |||||
Sbjct 965899 TTCGAGAGGTGATTTTATCAAACATGACGCGCTCCT 965934
Score = 89.7 bits (98), Expect = 7e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| || || || ||||| || || | |||| ||| |||| || || ||||||||||
Sbjct 963700 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 963759
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
| | ||||| || || |||||| | || || | || || ||||| || | | | |||
Sbjct 963760 TTAGGGATTGGCTCTGGTCGATGTAGGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 963819
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGG 68609
| || | |||||||||| || ||| | | ||| || | |||||||||
Sbjct 963820 TCTGTGATATTTCCCAAACTGTTTTATATAACTGCTTTAAATCATCTGG 963868
>seq22773
Length=730387
Score = 136 bits (150), Expect = 5e-27
Identities = 141/185 (76%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006
|| ||| |||||||||||||||||| || || ||||||||||||| || ||||| ||
Sbjct 299783 GAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTCACAGCTGGCCTCCAAA 299842
Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066
||| | |||||||| || || ||||||| | ||||||| || || ||| ||| ||
Sbjct 299843 GCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCACTTTCA 299902
Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
||||||||| | | ||||| || || || || | |||||||| || || || ||||||
Sbjct 299903 AATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCAATAGGT 299962
Query 69127 CTATG 69131
|| ||
Sbjct 299963 CTGTG 299967
Score = 87.8 bits (96), Expect = 2e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | |||||| || ||||||||||||||||| || || ||||| |||
Sbjct 301366 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTGAACCATTTCTCTGAGAGCAGGTTG 301425
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|| || ||||| |||| || || || | |||||| || | || || | ||| | |
Sbjct 301426 TAGGTCTCAATGGCTGCGTCCATGTCTTGTTTATGAATCCCCACAGCCACTCTCATGAGC 301485
Query 70111 ATATGCTGAGG 70121
|||||||| ||
Sbjct 301486 ATATGCTGGGG 301496
Score = 86.0 bits (94), Expect = 9e-12
Identities = 98/129 (76%), Gaps = 2/129 (2%)
Strand=Plus/Plus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|| ||||||||||| ||||| || ||||| ||||| | ||| ||||| | || ||| |
Sbjct 300724 ACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTGC 300783
Query 69655 TCTTCATTTCCTGTAttttt-tttAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 69713
|| || || || || ||||| |||||| || || ||||| | | |||| ||||||||||
Sbjct 300784 TCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATGG 300842
Query 69714 TTCTAGATA 69722
|| || ||
Sbjct 300843 CTCGAGGTA 300851
>seq19222
Length=928746
Score = 132 bits (146), Expect = 7e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| || || | ||| || ||| | || || |||||||||||||| | |||||
Sbjct 773895 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTT 773836
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| |||||| | ||||||||||| |||||||| ||||| || || ||||| ||||||||||
Sbjct 773835 TCAGCCAATAAATGGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATG 773776
Query 39759 CAACAAGTCTCTCTCC 39774
| |||| ||| || ||
Sbjct 773775 CCACAATTCTTTCACC 773760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686685039458400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |