Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16203 91.5 1e-13 seq20084 87.8 1e-12 >seq16203 Length=1080995 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108 ||||| |||| || || ||| | |||||||| || || || ||||||| ||||| Sbjct 991401 ATGGCTCTGCCCCCATGCCATGCTCTTTGTCAGTTCTATGTGTGTGATGGTGAGCTGTCC 991460 Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168 || || | ||||| | || ||||||||||| || || || || || || || || ||| Sbjct 991461 TGCCAGCTTTATCAGCGCTCTGGTGACATGGGGCTGGGAGTACCTTTCAATATTGCCAGT 991520 Query 41169 TATGCTCTGCTCACGTATATGATTGCACAC 41198 ||||| || || ||||| ||||| || ||| Sbjct 991521 TATGCACTTCTAACGTACATGATCGCCCAC 991550 >seq20084 Length=15297 Score = 87.8 bits (96), Expect = 1e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 ||||||||||| |||||||| || || || |||| || ||||| ||||| ||||| || Sbjct 11649 AACCCGTTTGACTTTATGGAGAACATCTCTCTGGAGGGAAAAACCAACTTCTTTGAGAAG 11590 Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 | || ||||| |||||| | |||||||||||| Sbjct 11589 AGAGTGGGAGAGTATCAGAGGATGGGCGTCATG 11557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397329765490300