Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq16203 91.5 1e-13
seq20084 87.8 1e-12
>seq16203
Length=1080995
Score = 91.5 bits (100), Expect = 1e-13
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCA 41108
||||| |||| || || ||| | |||||||| || || || ||||||| |||||
Sbjct 991401 ATGGCTCTGCCCCCATGCCATGCTCTTTGTCAGTTCTATGTGTGTGATGGTGAGCTGTCC 991460
Query 41109 TGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGT 41168
|| || | ||||| | || ||||||||||| || || || || || || || || |||
Sbjct 991461 TGCCAGCTTTATCAGCGCTCTGGTGACATGGGGCTGGGAGTACCTTTCAATATTGCCAGT 991520
Query 41169 TATGCTCTGCTCACGTATATGATTGCACAC 41198
||||| || || ||||| ||||| || |||
Sbjct 991521 TATGCACTTCTAACGTACATGATCGCCCAC 991550
>seq20084
Length=15297
Score = 87.8 bits (96), Expect = 1e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554
||||||||||| |||||||| || || || |||| || ||||| ||||| ||||| ||
Sbjct 11649 AACCCGTTTGACTTTATGGAGAACATCTCTCTGGAGGGAAAAACCAACTTCTTTGAGAAG 11590
Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587
| || ||||| |||||| | ||||||||||||
Sbjct 11589 AGAGTGGGAGAGTATCAGAGGATGGGCGTCATG 11557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397329765490300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |