Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 219 5e-52
seq22773 100 4e-16
seq19222 82.4 1e-10
>seq18889
Length=1054283
Score = 219 bits (242), Expect = 5e-52
Identities = 934/1444 (65%), Gaps = 54/1444 (4%)
Strand=Plus/Plus
Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727
||| ||||| |||||| || | ||| ||| | ||||||||| | ||||| |
Sbjct 964049 GTTTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGC 964108
Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787
||| | | | ||||| || || | ||||| || ||||||||||| ||||| || ||||
Sbjct 964109 TTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAA 964168
Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 110847
||| || ||||| | | ||| | | || ||||| || | | |||||| |
Sbjct 964169 CAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCA 964228
Query 110848 GTTGAGCTTGGTTT-CACCTT--CCCACATGTCAAACTGAAGCA--CCCCTTGGGACGCG 110902
| |||| || |||||| |||||||||| | || || | ||||| || |
Sbjct 964229 G---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTCACTGG 964285
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCC 110962
|||| || | || ||||| | || | ||| ||||| || ||||| ||||||
Sbjct 964286 GGAG--CCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCC 964343
Query 110963 AGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAA 111022
|||| || | || |||||||||||||| | ||||| | || ||||||| |||
Sbjct 964344 AGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCA---GAA 964400
Query 111023 ---TCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
||||||| || || | || || |||| || ||||| || ||||| | |||
Sbjct 964401 CTTTCAAATGGATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCA 964460
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTG 111136
|| || ||||| ||| | || || || | | | ||| || || || | || ||
Sbjct 964461 ATTGGCCTGTGGCGCTTGTTTGAATT---CTCTGCTTCAGGAACTGGGTAGTAGTTAATG 964517
Query 111137 TCAATGACTCGGTTTAGATTTTTGGTAACAAT--CTTT-GTGATTTCATGAAGTTTTTCA 111193
||||||| || |||||| | ||||| |||| |||| | ||| ||||
Sbjct 964518 TCAATGATCTTATTGAGATTTCTT---ACAATTACTTTAGTGACTGAGGCAAGCTTTTTG 964574
Query 111194 TAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253
||||||| ||||| ||| | | |||||| | || || ||||| ||||| ||
Sbjct 964575 AAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTA 964631
Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313
|| || || ||||| || ||| ||||| | ||| || || || ||||| |
Sbjct 964632 CAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCAT 964691
Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373
|| || || |||||||||| |||||||||||| |||| || ||||| ||||| | ||||
Sbjct 964692 TTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATG 964751
Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT-CGGCGGCTGG 111432
|| || || ||||| || ||||| || | | || || | ||| || | | | | || |
Sbjct 964752 TAAGGTGTTCCCGTTTCTGTCTGAGACTCTATGATGGCATACCACACCTGCTGAGCCTTG 964811
Query 111433 TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT- 111491
|| || || | | |||||| || || |||||| || ||||||||||
Sbjct 964812 ACCACCCGC-TTCACTCTACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCCTC 964870
Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCA 111550
| |||| | | || | ||| | || | || ||||| | | |||||| | ||
Sbjct 964871 CCCCCAACAC-TCATCCA-ACCCAGGGCACTCACTGGGACACATCAAAGACCA--GTCCT 964926
Query 111551 CCT--TCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608
| | || || | ||||||||| ||||| || ||||| |||| | ||||| ||||
Sbjct 964927 GGTTGTTTTCCACTCTCTTCATGAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTC 964986
Query 111609 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCC 111667
|| ||| || | ||| ||| || | | |||||| || || | | |||
Sbjct 964987 GCGCCCTCTGCTCCTCTTTACCAGTGTT-CTTCTTCAGCTCAAGAAAGTCAAACACATCA 965045
Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 111724
|||||||||||| | || | || | | ||| ||| | ||| |||| |
Sbjct 965046 AAGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCC 965105
Query 111725 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 111784
|||||||| || ||| ||| | || | ||||| || | || ||||| ||| | ||||
Sbjct 965106 ACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACCATTTGAGTTACCA 965165
Query 111785 TTTGTCCCCCGAATACGAGATTTATTG--GCTCTCACATCATGGATGTGC-ATCCCAATA 111841
||||| || ||| | | || || | ||| | | || | ||| | |||||
Sbjct 965166 TTTGTTCCAGCAAT--GTAACTTCCTGTTGATCTAATA-CAGCTAACTGCTACACCAATC 965222
Query 111842 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901
|| || || | || ||||| | ||||| | | || || |||| || || | ||
Sbjct 965223 CCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAATGCCATCAATG 965282
Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961
||| ||||| |||| | |||||||| ||||| | ||| ||||| || || ||
Sbjct 965283 CTGTCATCCTTCATGGCCAGCAGGAAGCAGCTGGAGAGCTGGGGTCTGTTAGTGCCTGCG 965342
Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTC 112020
||||| || || || | || ||| ||||| || | | |||| | || ||| |||||
Sbjct 965343 TTGAACAGAGTGGGAGAGGCATGAGTGAAC-CACTTCTCAGACAGCAGGTTGTAGGTCTC 965401
Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080
| | | | ||| || || |||||| |||| || || | ||||| ||||| |||
Sbjct 965402 AATGGCTGCATCTATATCAGAGTTGTGGATTCCGACAGCTACTCTCATGAGCATGTGCTG 965461
Query 112081 TGGG 112084
||||
Sbjct 965462 TGGG 965465
>seq22773
Length=730387
Score = 100 bits (110), Expect = 4e-16
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324
|||||| || |||||| |||| ||| || || || | |||| ||| || || ||
Sbjct 300283 CTCATCTTTGCTTGTGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCC 300342
Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384
| ||||| ||||| |||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct 300343 TAGATTCTGCTGGTTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACC 300402
Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417
|||||| |||||||| | | ||| || | |||
Sbjct 300403 CGTCTCTGTCTGTGACTCAATAATGGCATACCA 300435
Score = 86.0 bits (94), Expect = 8e-12
Identities = 142/204 (70%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 110903 GGAGAACCCTCAAAGGTTTCATAGGAACC---TTGGGCTTCAGCCAATTCACAGCTCGCC 110959
||||| || || | |||||||| | || |||||| ||| | ||||||||| |||
Sbjct 299780 GGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGC---AGCTAGTTCACAGCTGGCC 299836
Query 110960 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 111019
|||| | || | ||| ||||| ||||| || | || | | || ||| || ||
Sbjct 299837 TCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTGGGCCTCTTCA 299896
Query 111020 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
||||||| || || | ||| || | ||||| ||||| |||||||| | |||
Sbjct 299897 CTTTCAAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAACACCGATCCCA 299956
Query 111080 ATAGGTCTGTGTCGCATATTAGAC 111103
||||||||||| ||||| ||||||
Sbjct 299957 ATAGGTCTGTGGCGCATGTTAGAC 299980
>seq19222
Length=928746
Score = 82.4 bits (90), Expect = 1e-10
Identities = 95/123 (77%), Gaps = 4/123 (3%)
Strand=Plus/Minus
Query 122678 CCTCATCTCGGGAAATAAGTTCATTTG-AGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736
||||||||| | ||||||||||| | | ||| | || || ||||| ||||||| |||
Sbjct 773895 CCTCATCTCTGCTGATAAGTTCATTGGAATAAGTA-AGGCCAGGCATTAGACCCCTCTTT 773837
Query 122737 TTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAA 122795
|||| ||||||||| || ||| || || || |||||||| || ||||| ||| |||||
Sbjct 773836 TTCAGCCAATAAATGGCAGCA-AAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAA 773778
Query 122796 CGC 122798
||
Sbjct 773777 TGC 773775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627827418576000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |