Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 147 3e-30
seq20084 96.9 4e-15
seq22773 86.0 8e-12
>seq18889
Length=1054283
Score = 147 bits (162), Expect = 3e-30
Identities = 459/702 (65%), Gaps = 19/702 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| ||| | ||||| | || | | |||||||||| || | ||||| |||||||||
Sbjct 964089 TAGATGTTGCTGGTGTAGGCTTCGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAG 964148
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
||||||||||| || |||| | |||||||| | | ||| | || ||| |||
Sbjct 964149 GCTGTGGGCATAGGGGCCAACAACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCC 964208
Query 118302 TTGAG-AGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTG---CCACATATCAAACTG 118357
|| || ||| ||| |||| || |||| || | ||| |||||| || | ||
Sbjct 964209 TTAAGCAGCTTCC-AGTCCCAG---AGCTCAGTGGGCACCTTTTCCCACATGTCGTATTG 964264
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417
|| || || | |||| || || |||||||||| || || || || ||
Sbjct 964265 CAGAATGCCCCTACTCACTGGGGAGCCTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGC 964324
Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
||| ||| |||| ||||| ||||| || | || || |||||||| || | |||||
Sbjct 964325 CAACTCGCAGCTTGCCTCCAGGGCAGCATAGTAGATGGTTTCAAAGATCTGGATATTCAG 964384
Query 118478 TGCCTTGGCCTCGTCGGAA---TCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGA 118533
|| ||| || ||| ||||| | || ||| | || || |||| || |
Sbjct 964385 CAGCTGGGCTTCA---GAACTTTCAAATG-GATAACGCATGAGGATGAAGGCATCTGCAA 964440
Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA 118593
|||| || ||||||| |||||||| | || | | | || || ||| || |
Sbjct 964441 GACCCTGCACACCGATCCCAATTGGCCTGTGGCGCTTGTTTGAATTCTCTGCTTCAGGAA 964500
Query 118594 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 118653
| || || | || | || || | | |||| |||||| | | || || |||| |
Sbjct 964501 CTGGGTAGTAGTTAATGTCAATGATCTTATTGAGATTTCTTACAATTACTTTAGTGACTG 964560
Query 118654 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 118713
|||||||| | ||||||| |||| ||| | | |||||| | || || |
Sbjct 964561 AGGCAAGCTTTTTGAAATCAAAGGTGCGT---TCTGGAGTAACATACATGTTGAGAGCAA 964617
Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773
|||| |||| ||||| || | ||||| || || ||||| | ||| || ||||
Sbjct 964618 TTGAGGCCAAGTTACAGACGGCTACTTCATCTTTGCTTGTATACTCCACAATCTCAGTGC 964677
Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833
||||||| | || ||||||||||| |||| || || ||| ||||||| ||||
Sbjct 964678 ACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGGTTACTCTTCCTGTTACAGGCAT 964737
Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 118875
| ||||| | |||||| || || ||||| || || || ||||
Sbjct 964738 CTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGAGACT 964779
>seq20084
Length=15297
Score = 96.9 bits (106), Expect = 4e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094
||||||| ||| ||| ||||| || ||||| ||| || ||||| || || || ||||
Sbjct 12701 CCTCGTCGCGGCTGATAAGTTCGTTGGAGAAAGTCAGTCCGGGCATCAGGCCTCGTTTCT 12760
Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154
||| ||||||||| || || || |||||||||||||||||||||||| || || |
Sbjct 12761 TCAGCCAGAAAATGGCGGCGAACGATCCAGAGAAGAAGATCCCCTCCACAGCAGCAAAGG 12820
Query 130155 CAAAGAGACGCTC 130167
| | | ||||||
Sbjct 12821 CCACCACACGCTC 12833
>seq22773
Length=730387
Score = 86.0 bits (94), Expect = 8e-12
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
|| || ||| | ||||| | ||||| | |||||||||| || | ||| ||||| || |||
Sbjct 299251 TAAATGTTGCTGGTGTAAGCCTCAATGGACTCATTGTTGCCGAGGATCTGGGCAGTAGAG 299310
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||||||||| || |||| ||| ||||||||
Sbjct 299311 GCTGTGGGCATTGGGGCCAGGAGGAGGCTGTT 299342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618233744733600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |