Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 224 1e-53
seq20084 95.1 1e-14
>seq18889
Length=1054283
Score = 224 bits (248), Expect = 1e-53
Identities = 965/1498 (64%), Gaps = 48/1498 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||||||| ||||| ||||| | || || |||| || || || || ||| | |
Sbjct 965465 CCCACAGCACATGCTCATGAGAGTAGCTGTCGGAATCCACAACTCTGATATAGATGCAGC 965406
Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| ||| || | |||| | | || ||||| ||| || | || || || |
Sbjct 965405 CATTGAGACCTACAACCTGCTGTCTGAGAAGTG-GTTCACTCATGCCTCTCCCACTCTGT 965347
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || || || |||||||| | ||||| |||||||| | |||| ||||| |
Sbjct 965346 TCAACGCAGGCACTAACAGACCCCAGCTCTCCAGCTGCTTCCTGCTGGCCATGAAGGATG 965287
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| || | || || |||| || || | | ||||| | ||||| || | || |
Sbjct 965286 ACAGCATTGATGGCATTTATGACACACTGAAACAATGTGCTCTTATCTCTAAATCTGCAG 965227
Query 104460 GGGGTATTGGGAT-GCACATCCATGATGTGAGAGC--CAATAAATCTCGTATTCGGGGGA 104516
| || ||||| | ||| | || | | ||| | || || | | ||| || |
Sbjct 965226 GAGGGATTGGTGTAGCAGTTAGCTG-TATTAGATCAACAGGAAGTTAC--ATTGCTGGAA 965170
Query 104517 CAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCT 104576
|||||||| | ||| ||||| || | || ||||| | || | ||| ||| || ||||
Sbjct 965169 CAAATGGTAACTCAAATGGTCTTGTGCCGATGCTGAGAGTGTACAACAACACTGCACGCT 965110
Query 104577 ATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
|||| | |||| ||| | ||| ||| | | || | || | ||||||||||
Sbjct 965109 ATGTGGACCAAGGTGGCAATAAACGACCGGGTGCCTTTGCCATTTACTTGGAGCCATGGC 965050
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|| ||| | | || || |||||| || ||| ||| | |||||| | ||
Sbjct 965049 ACTTTGATGTGTTTGACTTTCTTGAGCTGAAGAAGAACACTGGTAAAGAGGAGCAGAGGG 964990
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|| || ||||||| || || ||||| || || || |||||||||||||| || | |
Sbjct 964989 CGCGAGACCTCTTCTATGCCCTATGGATCCCTGACCTGTTCATGAAGAGAGTGGAAAACA 964930
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGG 104811
| |||||| | | ||||| || | || ||||| | || || | |||
Sbjct 964929 ACCAGGACTGGTCTTTGATGTGTCCCAGTGAGTGC-CCTGGGTTGGATGAGTGTTGGGGG 964871
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGT 104871
||||||||||| || |||||| || || | || ||| | | || ||| |||
Sbjct 964870 -GAGGAGTTTGAGAAGCTGTACACACGATATGAACAGGAGGGTAGAGTGAA-GCG--GGT 964815
Query 104872 GC-CA--GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
| || ||| | |||||| | || || | ||||||| || || || || |||||
Sbjct 964814 GGTCAAGGCTCAGCAGGTGTGGTATGCCATCATAGAGTCTCAGACAGAAACGGGAACACC 964755
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
|||||| | |||||||| ||||||||| |||||||| || |||||||||| ||
Sbjct 964754 TTACATGTTGTACAAAGATGCCTGTAACAGGAAGAGTAACCAGCAGAATTTGGGCACCAT 964695
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
||| | || | || || || || |||| | |||| ||||||||| || ||
Sbjct 964694 CAAATGCAGTAACTTGTGCACTGAGATTGTGGAGTATACAAGCAAAGATGAAGTAGCCGT 964635
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGA 105108
|||||| | || ||||| |||||| || |||||| |||||| | || |||||
Sbjct 964634 CTGTAACTTGGCCTCAATTGCTCTCAACATGTATGTTACTCCAGA---ACGCACCTTTGA 964578
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAA---ACTGTCACCAAAAACCTAAACAGAGTTAT 105165
|| |||| || | ||| || ||| | ||| | ||| || || | | ||
Sbjct 964577 TTTCAAAAAGCTTGCCTCAGTCACTAAAGTAATTGTAAG---AAATCTCAATAAGATCAT 964521
Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225
||| | || | ||||| ||| || || || || | | | ||| | |||||
Sbjct 964520 TGACATTAACTACTACCCAGTTCCTGAAGCAGAGAATTCAAACAAGCGCCACAGGCCAAT 964461
Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGA--- 105282
||| ||||||| |||||||| || |||| ||||| || || | |||||||
Sbjct 964460 TGGGATCGGTGTGCAGGGTCTTGCAGATGCCTTCATCCTCATGCGTTATCCATTTGAAAG 964401
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
||| || ||| || | ||| | || ||||| ||||| || | || || ||
Sbjct 964400 TTCTGA---AGCCCAGCTGCTGAATATCCAGATCTTTGAAACCATCTACTATGCTGCCCT 964344
Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
||||| || | ||||||||||| || || || ||||| || | || || ||
Sbjct 964343 GGAGGCAAGCTGCGAGTTGGCAGAAAAGGACGGGCCTTATGAGACATACCCAGGCTCCCC 964284
Query 105403 AGCTTCACAAGGGG--TGCTTCAATTTGATATGTGGGAAGGTGAGACCA---AGCTTCAC 105457
|| | | ||||| | || |||| || ||||||||| | | ||| |||| |
Sbjct 964283 AG--TGAGTAGGGGCATTCTGCAATACGACATGTGGGAAAAGGTGCCCACTGAGCT---C 964229
Query 105458 TACGACTGGGAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCT 105516
| |||||| ||||| || ||||| || | | ||| | | ||||| || |
Sbjct 964228 TGGGACTGG-AAGCTGCTTAAGGAGAAGATTGCTAAACACGGTGTGAGGAACAGCCTGTT 964170
Query 105517 CATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 105576
|||| || ||||| ||||||||||| || ||||| | || || ||||| | | | ||
Sbjct 964169 GTTGGCCCCTATGCCCACAGCCTCCACAGCGCAAATACTTGGCAACAATGAGTCCATCGA 964110
Query 105577 ACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 105636
| ||||||| | |||||||| | ||| ||| | ||||||||| |||||| ||
Sbjct 964109 AGCCTACACCAGCAACATCTACACACGCAGAGTCCTGTCTGGAGAGTTTCAGATTGTAAA 964050
Query 105637 CAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGAT 105694
| ||||| || | ||||| | || || || ||| | |||| |||||| ||
Sbjct 964049 CCCACATCTGCTGAAGGACCTAACTGAACGGGGGCTGTGGAACGAGGAGATGAAGAAT 963992
>seq20084
Length=15297
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| ||||| ||| ||||| |||||||||||||| || ||| ||| |||| |||||
Sbjct 12821 GCCTTTGCTGCTGTGGAGGGGATCTTCTTCTCTGGATCGTTCGCCGCCATTTTCTGGCTG 12762
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
||||| ||||| || ||||| || || ||||||||||| |||||| || ||||||
Sbjct 12761 AAGAAACGAGGCCTGATGCCCGGACTGACTTTCTCCAACGAACTTATCAGCCGCGACGAG 12702
Query 94936 GGACT 94940
| |||
Sbjct 12701 GTACT 12697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583070802794400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |