Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3171 390 3e-103 seq4874 150 5e-31 seq1110 147 7e-30 seq10742 145 2e-29 seq24987 143 8e-29 seq22507 111 5e-19 seq19278 107 6e-18 seq18889 84.2 7e-11 seq4431 84.2 7e-11 >seq3171 Length=1257762 Score = 390 bits (432), Expect = 3e-103 Identities = 909/1359 (67%), Gaps = 29/1359 (2%) Strand=Plus/Minus Query 349304 TACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCT 349363 || ||||| || || || || ||||| | |||||||| | || ||||| || | || Sbjct 1255533 TATGTTGCCTTCACTGACACAGAGCGGTTAATTGGTGACGCAGCCAAAAACCAGGTGGCC 1255474 Query 349364 GCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC 349423 || || | || || | |||||||| ||| |||| || || |||| ||| |||| Sbjct 1255473 ATGAACCCGATTAACACCATCTTTGATGCCAAGAGACTCATAGGGAGAAAATTTGATGAC 1255414 Query 349424 AAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGAT 349483 | | ||| |||| | || | || ||||| | || | | ||| ||| Sbjct 1255413 CATATTGTGCAAGCTGACATGAAGCTTTGGCCTTTCAAAGTCATC---AGTGACAGTGGC 1255357 Query 349484 AAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAAT 349542 || || | | || || || || |||||||| ||||| | ||| | || |||||||| Sbjct 1255356 AAGCCCAAAGTAGAAGTGGAGTACAAAGGTGAGACAAAGGCGTTTTAT-CCAGAAGAAAT 1255298 Query 349543 TTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGT 349602 |||||||||||||| ||||| |||||||||||||| || || ||||| || | | ||| Sbjct 1255297 CTCATCAATGGTTTTGGTTAAGATGAAGGAAATTGCAGAGGCGTATTTGGGGCAGAGAGT 1255238 Query 349603 AACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAA 349662 | |||| || || || || || || ||||| || || ||||||| || ||||| Sbjct 1255237 GTCCAATGCAGTCATCACAGTCCCTGCTTATTTCAACGACTCCCAGCGCCAAGCCACAAA 1255178 Query 349663 AGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGC 349722 |||||| || ||| | || | ||||| || ||||| || |||||||| || || || Sbjct 1255177 AGATGCCGGAGTTATTTCTGGCCTGAATGTGCTGAGAATCATCAATGAACCAACCGCAGC 1255118 Query 349723 AGCAATTGCATATGGGCTTGATA-----AAATGAGTGACCAAGaaaaaaaTATTCTTATT 349777 || ||||||||||| | || | ||| ||| | || |||| |||| || Sbjct 1255117 CGCTATTGCATATGGTTTAGACAAGGGGAAAAGAGGG-----GAGCGAAATGTTCTCATC 1255063 Query 349778 TTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTT 349837 |||||| | |||||||| |||||||| ||||| | || ||| ||||||| || |||||| Sbjct 1255062 TTTGATCTGGGTGGTGGCACTTTTGACGTATCCATCCTGACAATTGAAGATGGTATTTTT 1255003 Query 349838 GAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTC 349897 || || ||||| || || ||||| ||||| | || |||||||| ||||| |||||| | Sbjct 1255002 GAGGTAAAAGCCACAGCCGGTGACACACACTTGGGCGGAGAAGACTTTGACAATCGTATG 1254943 Query 349898 GTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCC 349956 || ||| |||||| | || |||||| | |||| || | || ||| | | ||| Sbjct 1254942 GTGAAGCACTTTGTTGATGAGTTTAAGAG-AAAGCACAAGAAAGACATTAGCCAAAATAA 1254884 Query 349957 TAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC 350016 |||||| || | | || |||| || |||||||| || ||| | || ||||||| | Sbjct 1254883 GAGAGCAGTGAGGAGGCTGCGAACGGCATGTGAACGCGCCAAGAGGACCCTATCATCCAG 1254824 Query 350017 TACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTAT 350076 |||||| | || |||||||| ||||| ||| || | || || | | || || Sbjct 1254823 CACCCAAGCAAGCATCGAAATTGACTCTCTATATGAAGGAATTGACTTTTACACCTCAAT 1254764 Query 350077 TACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGT 350136 || |||||| | ||||||||| | || || || || | |||| | || || || Sbjct 1254763 CACTCGTGCTAGATTTGAAGAACTCAACTCAGACCTCTTCAGGGGAACACTAGACCCAGT 1254704 Query 350137 GGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGT 350196 || |||| ||| |||| || || || ||| |||| | || | || | || Sbjct 1254703 TGAGAAAGCTTTACAAGACGCCAAGCTGGACAAGTCCAAGATCAACGACATCGTCCTGGT 1254644 Query 350197 TGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAA 350256 |||||| || || | ||||| ||| | ||| | |||| || || |||||||| || Sbjct 1254643 TGGTGGATCCACGAGAATTCCTAAAATCCAAAAACTACTGCAGGACTTCTTTAATGG-AA 1254585 Query 350257 AGAACCT--TCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAG 350314 | | | | | | | || || ||||||||||| || || ||||| ||||| || ||| Sbjct 1254584 GGGAGTTGAACAAAAGC-ATCAACCCAGATGAAGCAGTGGCCTATGGAGCTGCGGTACAG 1254526 Query 350315 GCATCTAT-TTTATCTGG---AAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGA 350370 || |||| | || || | | ||| || | | || || | | ||||| Sbjct 1254525 GCTGCTATCCTGATGGGGGACACCTCGGAG----AATGTCCAGGACCTCCTTTTGCTAGA 1254470 Query 350371 TGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCC 350430 ||| ||||||| || | || | ||||| | || | ||||||||| | | || Sbjct 1254469 TGTTGCTCCACTGTCTTTGGGCATTGAAACAGCAGGAGGAGTAATGACCGCGTTGATCAA 1254410 Query 350431 TAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCA 350490 | || | || | || || ||| | |||||| || || || | | ||||| || Sbjct 1254409 GCGTAACACCACCATCCCCACCAAACAAACCCAAATCTTCTCCACCTACTCCGATAACCA 1254350 Query 350491 GCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAA 350550 ||||| || || || || |||||||||||| | || |||||||| || || Sbjct 1254349 GCCAGGTGTGCTCATCCAGGTGTTTGAAGGTGAAAGGGCCATGACTAAAGACAACAACCT 1254290 Query 350551 ACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGA 350610 || || ||||| ||| | | || |||||| || |||||||| || |||||||| Sbjct 1254289 CCTCGGCAAATTTGACCTGACGGGGATCCCACCAGCCCCAAGAGGAGTCCCGCAGATTGA 1254230 Query 350611 AGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 ||| | ||||| |||||| | ||||| || | ||||| Sbjct 1254229 AGTAACATTCGACATTGATGCGAATGGCATCCTCAATGT 1254191 Score = 217 bits (240), Expect = 4e-51 Identities = 578/876 (66%), Gaps = 8/876 (1%) Strand=Plus/Plus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 ||||| | || ||||| | |||| || |||| |||||||||||| || || |||| | Sbjct 1254191 ACATTGAGGATGCCATTCGCATCAATGTCGAATGTTACTTCAATCTGCGGGACTCCTCTT 1254250 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || |||||| || || || | ||||| || | || || |||||||| | Sbjct 1254251 GGGGCTGGTGGGATCCCCGTCAGGTCAAATTTGCCGAGGAGGTTGTTGTCTTTAGTCATG 1254310 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 || || || |||||| | || || || || ||||||| ||||| || || || Sbjct 1254311 GCCCTTTCACCTTCAAACACCTGGATGAGCACACCTGGCTGGTTATCGGAGTAGGTGGAG 1254370 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCG-GAACAATTACAGTCATTAC 183157 || | ||| ||| || | || || || | || ||| || ||| | |||||||| Sbjct 1254371 AAGATTTGGGTTTGTTTGGTGGGGATGGTGGTGTTACGCTTGATCAACG-CGGTCATTAC 1254429 Query 183158 TTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGA 183217 | ||| || ||||| | || || || | ||| || |||||||| || | | || Sbjct 1254430 TCCTCCTGCTGTTTCAATGCCCAAAGACAGTGGAGCAACATCTAGCAAAAGGAGGTCCTG 1254489 Query 183218 TGTTTTATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAAC 183277 || || || | | | | || ||||| || || || || ||||| || || Sbjct 1254490 GACATTCTCCGAGGTGTCCCCCATCAGGATAGCAGCCTGTACCGCAGCTCCATAGGCCAC 1254549 Query 183278 AGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTAAAAAATTCTGAAAGCA 183336 |||||||||||||| || | | | || || | |||||||| || || || | Sbjct 1254550 TGCTTCATCTGGGTTGAT-GCTTTTGTTCAACTCCCTTCCATTAAAGAAGTCCTGCAGTA 1254608 Query 183337 TTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATT-- 183394 || ||| ||||| |||||||| || || ||||| || | || | || | ||| || Sbjct 1254609 GTTTTTGGATTTTAGGAATTCTCGTGGATCCACCAACCAGGACGATGTCGTTGATCTTGG 1254668 Query 183395 ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAA 183454 |||| | | || | | |||| |||| |||| ||||| ||||| | ||| || || Sbjct 1254669 ACTTGTCCAGCTTGGCG--TCTTGTAAAGCTTTCTCAACTGGGTCTAGTGTTCCCCTGAA 1254726 Query 183455 TAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACC 183514 | ||| | ||||| ||||| || | ||| | || | |||||||||| || Sbjct 1254727 GAGGTCTGAGTTGAGTTCTTCAAATCTAGCACGAGTGATTGAGGTGTAAAAGTCAATTCC 1254786 Query 183515 ATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGC 183574 | ||||| || |||||||| || || ||| || ||||||| || || || || Sbjct 1254787 TTCATATAGAGAGTCAATTTCGATGCTTGCTTGGGTGCTGGATGATAGGGTCCTCTTGGC 1254846 Query 183575 TCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCTTGTTT 183634 ||||||||||| |||| || | | | || ||| ||| | |||| |||| || Sbjct 1254847 GCGTTCACATGCCGTTCGCAGCCTCCTCACTGCTCTCTTATTTTGGCTAATGTCTTTCTT 1254906 Query 183635 ATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACC 183694 || ||||| ||||| ||| || ||| || | | | | | ||||| ||||| || Sbjct 1254907 GTGCTTTCTCTTAAACTCATCAACAAAGTGCTTCACCATACGATTGTCAAAGTCTTCTCC 1254966 Query 183695 ACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAA 183754 || || ||||| || || || || ||||| || ||||| || || |||||||| | | Sbjct 1254967 GCCCAAGTGTGTGTCACCGGCTGTGGCTTTTACCTCAAAAATACCATCTTCAATTGTCAG 1255026 Query 183755 AATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || ||||| ||||| || |||||||||| |||||| Sbjct 1255027 GATGGATACGTCAAAAGTGCCACCACCCAGATCAAA 1255062 >seq4874 Length=535125 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| | | | || |||||||| || ||||| ||||| || || || || || Sbjct 502033 CATACCACCCCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTC 501974 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||||||||| ||||| ||||||||||| || | |||||||| || Sbjct 501973 GGAGAGGGTGCGGCCATCTTCAAGCTGTTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 501914 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || ||||| || || || ||||| ||||| ||||| | || || || Sbjct 501913 GGGAATGCCCTCCTTATCTTGGATCTTGGCTTTAACATTCTCAATAGTGTCGCTGGGCTC 501854 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| |||| || || || || || ||||| ||||| |||||||| Sbjct 501853 CACCTCAAGGGTAATGGTTTTGCCAGTGAGGGTTTTCACAAAGATCTGCAT 501803 Score = 134 bits (148), Expect = 4e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || || ||||| || || || || ||||| | || || |||||| Sbjct 502926 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 502867 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 ||||| || || || |||||||| || | |||||||| || ||||| ||||| || ||| Sbjct 502866 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCC 502807 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| || || || || || || | ||| Sbjct 502806 TGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTC 502747 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || ||||| ||||| |||||||| Sbjct 502746 TTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502715 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| | | | || |||||||| || ||||| ||||| || || || || || Sbjct 502261 CATACCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTC 502202 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||||||||| || || || || ||||| || | |||||||| || Sbjct 502201 GGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGG 502142 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || || || || || ||||| | ||| || || Sbjct 502141 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTC 502082 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || ||||| ||||| |||||||| Sbjct 502081 CACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502031 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| | | | || |||||||| || ||||| ||||| || || || || || Sbjct 502489 CATACCACCTCTCAGACGCAGGACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTC 502430 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||||||||| || || || || ||||| || | |||||||| || Sbjct 502429 GGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGG 502370 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || || || || || ||||| | ||| || || Sbjct 502369 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTC 502310 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| || || || ||||| ||||| |||||||| Sbjct 502309 CACCTCCAGAGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502259 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| | | | || |||||||| || || || ||||| || || || || || Sbjct 502717 CATACCACCCCTCAGACGCAGGACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTC 502658 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||||||||| || || || || ||||| || | |||||||| || Sbjct 502657 GGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGATCTGG 502598 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| ||||| || ||||| || || || || || || ||||| | ||| || || Sbjct 502597 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTTTCAATAGTGTCACTGGGCTC 502538 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || |||| ||||| || || || ||||| ||||| |||||||| Sbjct 502537 CACCTCCAGAGTAATGGTCTTCCCAGTGAGGGTTTTCACAAAGATCTGCAT 502487 Score = 104 bits (114), Expect = 7e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 140593 GTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTT 140652 |||| || |||||||| || | |||||| || ||||| ||||| || ||||| || | Sbjct 504553 GTTTGCCGGCAAAGATCAGTCTCTGCTGAAATGGGGGAATGCCTTCCTTGTCCTGGATCT 504494 Query 140653 TAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGG 140712 | ||||| ||||| |||||| ||| |||||||| || || || | ||||| || | Sbjct 504493 TGGCTTTAACATTTTCAATCATGTCACTGGGTTCAACCTCCAGAGTGATGGTCTTCCCAG 504434 Query 140713 TTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| |||||||||||||| Sbjct 504433 TGAGGGTTTTCACAAAAATCTGCAT 504409 >seq1110 Length=1300725 Score = 147 bits (162), Expect = 7e-30 Identities = 358/540 (66%), Gaps = 2/540 (0%) Strand=Plus/Plus Query 349766 aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAA 349825 ||| | || |||||||| | || ||||| |||||||||||||| | | || ||||| Sbjct 26547 AATGTCCTCATTTTTGACCTTGGAGGTGGCACTTTTGATGTATCCATCTTGACCATTGAA 26606 Query 349826 GAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTT 349885 || || ||||||||||| ||| | || ||||| || || || | || ||||| || ||| Sbjct 26607 GATGGTATTTTTGAAGTCAAATCCACAGCTGGAGACACTCACTTGGGAGGAGAGGACTTT 26666 Query 349886 GATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATT 349945 || || || | || |||||| || || || || | | ||||| || || Sbjct 26667 GACAACCGCATGGTAAATCATTTTATTGCTGAGTTCAAAAGGAAGTTTAAAAAAGAAATC 26726 Query 349946 GGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCC 350005 | || |||||| ||||||| || | || || ||||| || || ||||| || Sbjct 26727 ACCAACAACAAAAGAGCAGTGCGTCGTCTGCGGACGGCCTGTGAGCGGGCCAAGCGCACC 26786 Query 350006 TTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC 350065 | || | ||||| || ||| ||||| || ||||| || || || ||| Sbjct 26787 CTCTCCAGCAGCACCCAGGCCAGTATCGAAATCGACTCTCTGTACGAAGGAGTGGACTTC 26846 Query 350066 TTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACA 350125 | | || ||||| | || || |||||||| || | || || || | | || Sbjct 26847 TACACCTCCATTACTAGAGCCCGCTTTGAAGAGCTAAATGCTGACCTGTTCCGTGGCACG 26906 Query 350126 ATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAA 350185 |||| |||||||| || | || | ||||| |||||| ||| || || |||| Sbjct 26907 TTGGAGCCTGTGGAGAAGGCCTTGAGGGATGCCAAAATGGACAAGGCACAAATCCATGAC 26966 Query 350186 GTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTT 350245 | || | ||||| || || ||||||||||| ||| | ||| |||| || || || Sbjct 26967 ATTGTCCTGGTTGGAGGCTCCACACGTATTCCCAAAATCCAAAAGTTGCTTCAAGACTTC 27026 Query 350246 TTTAATGGCAAAGAACCTTCT-AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304 || ||||| | ||| | | ||| | || || |||||||| ||||| || |||||||| Sbjct 27027 TTCAATGGGAGAGACCTGAATAAGAGC-ATCAACCCAGATGAGGCTGTGGCCTATGGTGC 27085 Score = 116 bits (128), Expect = 1e-20 Identities = 348/532 (65%), Gaps = 4/532 (1%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAA 183321 |||||||||| || ||||| ||||||||||| || | | ||| | ||||| | Sbjct 27087 CTGCACCATAGGCCACAGCCTCATCTGGGTTGATGCTCTTATTCAGGTCTCTCCCATTGA 27028 Query 183322 AAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTA 183381 | || ||| ||||| | ||| ||||| ||||| | || || || || || | || | Sbjct 27027 AGAAGTCTTGAAGCAACTTTTGGATTTTGGGAATACGTGTGGAGCCTCCAACCAGGACAA 26968 Query 183382 CTTCATCGATAT-TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCC 183440 |||| ||| | | | || | | |||| | ||| | || | || || ||||| ||| Sbjct 26967 TGTCATGGATTTGTGCCTTGTCCATTTTG-GCATCCCTCAAGGCCTTCTCCACAGGCTCC 26909 Query 183441 ATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaa 183500 | || | || | || | || |||||| || | |||||||| | || | Sbjct 26908 AACGTGCCACGGAACAGGTCAGCATTTAGCTCTTCAAAGCGGGCTCTAGTAATGGAGGTG 26849 Query 183501 aaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG-A 183559 | ||||| | || | || | || || ||||| || | || || | || || | Sbjct 26848 TAGAAGTCCACTCCTTCGTACAGAGAGTCGATTTCGATACTGGCCTGGGT-GCTGCTGGA 26790 Query 183560 TAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATC 183619 | || | || || || ||||| || || | || ||||| | || |||| || | Sbjct 26789 GAGGGTGCGCTTGGCCCGCTCACAGGCCGTCCGCAGACGACGCACTGCTCTTTTGTTGTT 26730 Query 183620 TGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGT 183679 || || |||| |||| || ||||| || |||| ||||||||| | | | | | Sbjct 26729 GGTGATTTCTTTTTTAAACTTCCTTTTGAACTCAGCAATAAAATGATTTACCATGCGGTT 26670 Query 183680 ATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCC 183739 ||||| || || || || || || || || ||||| || | ||| |||||||| || || Sbjct 26669 GTCAAAGTCCTCTCCTCCCAAGTGAGTGTCTCCAGCTGTGGATTTGACTTCAAAAATACC 26610 Query 183740 GTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 |||||||| | || || ||||||||||| || ||||| || | |||||| Sbjct 26609 ATCTTCAATGGTCAAGATGGATACATCAAAAGTGCCACCTCCAAGGTCAAAA 26558 Score = 96.9 bits (106), Expect = 1e-14 Identities = 108/142 (76%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||| | ||||| || ||||| || ||||| ||||||| ||||| ||||||| Sbjct 26315 ATGCAGTTGTAACTGTCCCTGCCTACTTCAATGACTCCCAGCGCCAGGCAACCAAAGATG 26374 Query 349668 CTGGCAGC-ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 |||| ||| ||||| ||| | ||||| || | || || |||||||| || || ||||| Sbjct 26375 CTGG-AGCTATTGCTGGGCTTAATGTGCTGCGTATCATCAATGAACCAACAGCAGCAGCC 26433 Query 349727 ATTGCATATGGGCTTGATAAAA 349748 ||||| ||||| | || |||| Sbjct 26434 ATTGCCTATGGCTTGGACAAAA 26455 >seq10742 Length=3397572 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 140525 TAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATC 140584 ||| || || || || || ||||| || || || || || ||||| | || || ||||| Sbjct 2148691 TAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATC 2148750 Query 140585 TTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644 ||| || || || ||||| || || || | ||||||||||||||||| || ||||| || Sbjct 2148751 TTCTAGCTGCTTACCAGCGAAAATCAGCCTCTGCTGATCAGGAGGAATACCCTCTTTGTC 2148810 Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704 |||||||| ||||| ||||| ||||| | ||| ||||||||| || | || | || Sbjct 2148811 TTGAATTTTGGCTTTCACATTCTCAATGGTGTCACTTGGTTCAACCTCCAAAGTGATGGT 2148870 Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || || || ||||| |||||||| Sbjct 2148871 CTTCCCAGTCAGGGTCTTAACAAAGATCTGCAT 2148903 Score = 111 bits (122), Expect = 5e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || |||||||| || || || || | || || |||||||||| Sbjct 2148469 CAAG-TGGAGGGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGTGCGACCATCTTCAA 2148527 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||| || || || | || || |||||||| || || ||||| ||||| | Sbjct 2148528 GCTGCTTACCAGCGAAAATCAGCCTCTGTTGGTCAGGAGGGATACCCTCTTTGTCCTGGA 2148587 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || ||||| | ||| ||||| || || | || | ||||| | Sbjct 2148588 TCTTTGCCTTGACGTTTTCAATGGTGTCACTAGGTTCCACCTCCAAAGTGATGGTCTTCC 2148647 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || ||||| |||||||| Sbjct 2148648 CAGTCAGGGTCTTAACAAAGATCTGCAT 2148675 >seq24987 Length=1398849 Score = 143 bits (158), Expect = 8e-29 Identities = 354/534 (66%), Gaps = 20/534 (4%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAAT----TGAACGAGATAATTCTTTGCCA 183317 |||| ||||| || || || || || ||||| || | | ||| ||| || ||| Sbjct 197894 CTGCTCCATAGGCCACTGCCTCGTCAGGGTTGATGCTCTTATTGAG----TTCCTTCCCA 197839 Query 183318 TTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAAT 183377 ||||| || ||| || | || ||||| || ||||| | || || || || ||||| Sbjct 197838 TTAAAGAAGTCTTGCAGAAGTTTCTGAATCTTAGGAATGCGGGTGGAGCCTCCAACTAAG 197779 Query 183378 ACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGG 183437 || | |||| || | |||| | ||||| | | | ||| ||| || Sbjct 197778 ACAATCTCATGTATCT--------CTAAGTCT--AATCTCTAAGTGCATTTCTAACTGGC 197729 Query 183438 TCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGAT 183497 |||| || || | |||||| ||| | | ||| || || | ||||| || | || Sbjct 197728 TCCAATGTCTTACGAAATAAGTCTGAATTGATCTCCTCAAAGCGGGCTCTGGTGATCGAG 197669 Query 183498 GaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGAT 183557 | | |||||| | || | | | | |||||||||||||| || ||| || || Sbjct 197668 GTGTAGAAGTCAGTGCCCTCAAACAGAGAATCAATTTCAATGCTTGCTTGCGTGCTGGAA 197609 Query 183558 GATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTA 183617 || || |||| || || | ||||| ||||| | || ||||| | ||| ||| || Sbjct 197608 GACAAGGTTCGCTTGGCCCTCTCACAGGCTGTGCGAAGGCGACGCAGTGACCTTTTGTTG 197549 Query 183618 TCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAAT-AAAATGTTGAAGTAATCT 183676 | |||||| ||| || || | || || |||| || |||| ||| | | Sbjct 197548 GTTCCTATATCTACTTTGTGCTTACGGTTGAACTCAGCCATGAAAAAGTTCACCATACGA 197489 Query 183677 TGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATAT 183736 | ||||||||||||||||||||||||| ||||| || || ||||| || |||||||| || Sbjct 197488 T-TATCAAAATCTTCACCACCTAAATGAGTATCCCCTGCTGTAGCCTTCACTTCAAAAAT 197430 Query 183737 TCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || |||||| | | ||| || |||||||| || || || |||||||| || Sbjct 197429 ACCTTCGTCAATAGTCAGAATGGAGACATCAAACGTGCCGCCCCCCAAATCGAA 197376 Score = 125 bits (138), Expect = 2e-23 Identities = 228/330 (69%), Gaps = 8/330 (2%) Strand=Plus/Plus Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || ||||| || || || || |||||||| || | || || |||| || || Sbjct 197370 CTCATCTTCGATTTGGGGGGCGGCACGTTTGATGTCTCCATTCTGACTATTGACGAAGGT 197429 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 ||||||||||| || || || || || ||||| ||| | ||||| ||||||||||||||| Sbjct 197430 ATTTTTGAAGTGAAGGCTACAGCAGGGGATACTCATTTAGGTGGTGAAGATTTTGATAAT 197489 Query 349892 CGTCTCGTTTCGCATTTTGTTA---AAGAATTTAAGCGTCAAGC-TAAAATTGATATTGG 349947 ||| | || | | ||| | | || || || ||| |||| ||| | ||||| || Sbjct 197490 CGTATGGT---GAACTTTTTCATGGCTGAGTTCAACCGT-AAGCACAAAGTAGATATAGG 197545 Query 349948 AGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTT 350007 | || || || |||||||||| | || || ||||| | || ||||| |||| Sbjct 197546 AACCAACAAAAGGTCACTGCGTCGCCTTCGCACAGCCTGTGAGAGGGCCAAGCGAACCTT 197605 Query 350008 ATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTT 350067 || || | || ||| | ||||||||||||||||| ||| |||| || |||| Sbjct 197606 GTCTTCCAGCACGCAAGCAAGCATTGAAATTGATTCTCTGTTTGAGGGCACTGACTTCTA 197665 Query 350068 TTCATCTATTACACGTGCTCGGTTTGAAGA 350097 | || || || | || || ||||| || Sbjct 197666 CACCTCGATCACCAGAGCCCGCTTTGAGGA 197695 >seq22507 Length=215086 Score = 111 bits (122), Expect = 5e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | || ||||||||||||| |||||||| || ||| | || ||| || | Sbjct 115325 ATTGATGAGATCGTGCTAGTTGGTGGTTCAACACGTATCCCCAAAATCCAGCAGCTAGTG 115266 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 || || || |||||||||||||| || ||| || || |||||||| ||||| || Sbjct 115265 AAGGAATTCTTCAATGGCAAAGAACCCTCAAGAGGCATCAACCCAGATGAGGCTGTGGCT 115206 Query 350297 TATGGTGCTGCTGTTCAGGCA 350317 ||||| |||||||| |||||| Sbjct 115205 TATGGGGCTGCTGTGCAGGCA 115185 Score = 84.2 bits (92), Expect = 7e-11 Identities = 128/179 (72%), Gaps = 5/179 (3%) Strand=Plus/Minus Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292 |||||| ||| | | |||| ||||| || || || || ||||| || || ||| | | Sbjct 116587 GTGTTGGTGTATTCAAGAATGGCCGTGTGGAGATCATCGCCAATGACCAGGGAAACCGCA 116528 Query 349293 CAACGCCATCATACGTTGCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAA 349349 || |||||||| || || || || || ||||||| ||||||||||| |||| | Sbjct 116527 TCACTCCATCATATGTGGCCTTCACTAGTGAGGGTGAGCGTCTGATTGGTGATGCTGCCA 116468 Query 349350 AAAATCAAGCT-GCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 | |||| |||| || | || || | || ||||| |||||||| ||| | || ||||| Sbjct 116467 AGAATC-AGCTCACTTCAAACCCTGAGAACACGGTGTTTGATGCCAAGAGGCTCATTGG 116410 >seq19278 Length=709666 Score = 107 bits (118), Expect = 6e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| || |||||||| ||||| || ||||| ||||||| || ||||| |||| Sbjct 296492 ATGCTGTAATCACTGTACCTGCCTACTTCAATGACTCCCAGCGCCAGGCTACAAAGGATG 296433 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||||| ||| | || | ||||| || | || |||||||| |||||||||||||| | Sbjct 296432 CTGGCACCATCTCTGGCGTTAATGTCCTTCGTATCATTAATGAGCCCACTGCTGCAGCTA 296373 Query 349728 TTGCATATGGGCTTGATAA 349746 | || ||||| || || || Sbjct 296372 TCGCCTATGGTCTGGACAA 296354 Score = 107 bits (118), Expect = 6e-18 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 349605 CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAG 349664 || ||||||| || |||||||| ||||| || || || ||||||| || ||||| | Sbjct 314210 CTAATGCTGTAATCACTGTACCTGCCTACTTCAACGACTCCCAGCGCCAGGCTACAAAGG 314269 Query 349665 ATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAG 349724 ||||||||| ||| | || | ||||| || | || |||||||| ||||||||||||| Sbjct 314270 ATGCTGGCACCATCTCTGGCCTTAATGTCCTTCGTATCATTAATGAGCCCACTGCTGCAG 314329 Query 349725 CAATTGCATATGGGCTTGATAA 349746 | ||||| ||||| || || || Sbjct 314330 CTATTGCCTATGGTCTGGACAA 314351 >seq18889 Length=1054283 Score = 84.2 bits (92), Expect = 7e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 206449 TGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAA 206508 ||||| | ||| || || || || || | || | ||||| || | || |||||| || Sbjct 965100 TGGTCCACATAGCGTGCAGTGTTGTTGTACACTCTCAGCATCGGCACAAGACCATTTGAG 965159 Query 206509 GTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATG-TAATCC 206567 | ||||||||||| ||| | ||| || || ||||||| | || || || || Sbjct 965160 TTACCATTTGTTCCAGCAATGTAACTTCCTGTTGATCTAATA-CAGCTAACTGCTACACC 965218 Query 206568 AATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATC 206627 ||| |||||||| |||| || ||| |||||||| ||| | ||| | |||||| ||||| Sbjct 965219 AATCCCTCCTGCAGATTTAGAGATAAGAGCACATTGTTTCAGTGTGTCATAAATGCCATC 965278 Query 206628 AACACTATCA 206637 || || ||| Sbjct 965279 AATGCTGTCA 965288 >seq4431 Length=749 Score = 84.2 bits (92), Expect = 7e-11 Identities = 70/82 (85%), Gaps = 3/82 (4%) Strand=Plus/Minus Query 235882 CAATATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGG 235941 ||||| |||||||| ||| |||| ||||||| ||||||||| |||||||||||||| ||| Sbjct 725 CAATAGAGGGGGAT-TAGCTCAAATGGTAGAGCGCTCGCTTAGCATGCGAGAGGTAGCGG 667 Query 235942 GATCAAAACCCAGCAT-CTCCA 235962 |||| | ||| |||| ||||| Sbjct 666 GATCGATGCCC-GCATCCTCCA 646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514748466026180