Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq16203 118 9e-22
>seq16203
Length=1080995
Score = 118 bits (130), Expect = 9e-22
Identities = 124/163 (76%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 29941 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 30000
||| || |||| ||| || ||||||||||| || || | || ||||| || || || ||
Sbjct 991562 TAGTCCTGTGATGTGGGCGATCATGTACGTTAGAAGTGCATAACTGGCAATATTGAAAGG 991503
Query 30001 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCT 30060
||| || ||||||||||| || || | ||| || ||||| || || ||||| || || |
Sbjct 991502 TACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCACCATCACA 991443
Query 30061 CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATG 30103
||| || |||||||| | || ||||| || || |||||||||
Sbjct 991442 CACATAGAACTGACAAAGAGCATGGCATGGGGGCAGAGCCATG 991400
Score = 102 bits (112), Expect = 7e-17
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 30230 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30289
||||||||||| || || || |||||||| || || || || || || |||||||||||
Sbjct 991094 GTGTACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCC 991035
Query 30290 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349
|| | | || || | ||||||| || || | || || ||||| ||||| |||
Sbjct 991034 TCTCGATTAGTAAATCCATTGTTGTCCAGGAATTCACGAGACCCATTGGCATCCCAAATC 990975
Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390
|| ||||| || |||||||||||||||| || || || ||
Sbjct 990974 TTCACCCCTTTTGCAGAGAGCTCTTTGGAATTGGTTGATCC 990934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406181353277520
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |