Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq16203 120 3e-22
>seq16203
Length=1080995
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636
||||| || ||||| ||||| | || || || ||||| || |||| |||||||||
Sbjct 991401 ATGGCTCTGCCCCCATGCCATGCTCTTTGTCAGTTCTATGTGTGTGATGGTGAGCTGTCC 991460
Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696
|||||||| ||||| || || || ||||||||| | || || || ||||| ||||| |||
Sbjct 991461 TGCCAGCTTTATCAGCGCTCTGGTGACATGGGGCTGGGAGTACCTTTCAATATTGCCAGT 991520
Query 34697 TACGCTCTGCTCACGTACATGATCGCTCA 34725
|| || || || |||||||||||||| ||
Sbjct 991521 TATGCACTTCTAACGTACATGATCGCCCA 991549
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| |||||||||||||| || || || ||||| ||||| ||||| || || || | ||||
Sbjct 991549 TGGGCGATCATGTACGTTAGAAGTGCATAACTGGCAATATTGAAAGGTACTCCCAGCCCC 991490
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||| || || || ||||| ||||||||||||||||| |||| || ||||| ||
Sbjct 991489 ATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCACCATCACACACATAGAACTGA 991430
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768
|| || | ||||| ||||| || |||||
Sbjct 991429 CAAAGAGCATGGCATGGGGGCAGAGCCAT 991401
Score = 104 bits (114), Expect = 2e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361
|||| |||||||| | ||||||||||| ||||| || | |||||||| || || |
Sbjct 990947 CCAAAGAGCTCTCTGCAAAAGGGGTGAAGATTTGGGATGCCAATGGGTCTCGTGAATTCC 991006
Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421
||||||| || || | ||| |||||||| ||| | || || ||||| || || |
Sbjct 991007 TGGACAACAATGGATTTACTAATCGAGAGGAGGGAGACCTTGGGCCTGTCTATGGCTTTC 991066
Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446
||||||||||||||||||| |||||
Sbjct 991067 AGTGGAGACACTTTGGGGCAGAGTA 991091
Score = 104 bits (114), Expect = 2e-17
Identities = 110/145 (76%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
||||| |||||||||||||||||||| || || ||||| || || | ||| ||||||||
Sbjct 991091 TACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCCTCT 991032
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
||| | || || |||||||| || || |||||||| | || ||||| ||||||
Sbjct 991031 CGATTAGTAAATCCATTGTTGTCCAGGAATTCACGAGACCCATTGGCATCCCAAATCTTC 990972
Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043
||||| | |||||||| ||||
Sbjct 990971 ACCCCTTTTGCAGAGAGCTCTTTGG 990947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448116378523200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |