Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq16203 118 8e-22
>seq16203
Length=1080995
Score = 118 bits (130), Expect = 8e-22
Identities = 124/163 (76%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
||| || |||| ||| || ||||||||||| || || | || ||||| || || || ||
Sbjct 991562 TAGTCCTGTGATGTGGGCGATCATGTACGTTAGAAGTGCATAACTGGCAATATTGAAAGG 991503
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326
||| || ||||||||||| || || | ||| || ||||| || || ||||| ||||| |
Sbjct 991502 TACTCCCAGCCCCATGTCACCAGAGCGCTGATAAAGCTGGCAGGACAGCTCACCATCACA 991443
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369
|| || |||||||| | || ||||| || || |||||||||
Sbjct 991442 CACATAGAACTGACAAAGAGCATGGCATGGGGGCAGAGCCATG 991400
Score = 93.3 bits (102), Expect = 3e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 27496 GTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 27555
||||||||||| || || || ||||| || || || || || || || |||||||||||
Sbjct 991094 GTGTACTCTGCCCCAAAGTGTCTCCACTGAAAGCCATAGACAGGCCCAAGGTCTCCCTCC 991035
Query 27556 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 27615
|| | | || || | ||||||| || || | || || ||||| ||||| |||
Sbjct 991034 TCTCGATTAGTAAATCCATTGTTGTCCAGGAATTCACGAGACCCATTGGCATCCCAAATC 990975
Query 27616 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656
|| ||||| || | |||||||||||||| || || || ||
Sbjct 990974 TTCACCCCTTTTGCAGAGAGCTCTTTGGAATTGGTTGATCC 990934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369389842203860
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |