Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq18889 708 0.0 seq22773 132 7e-26 >seq18889 Length=1054283 Score = 708 bits (784), Expect = 0.0 Identities = 1337/1958 (68%), Gaps = 13/1958 (1%) Strand=Plus/Plus Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118 ||||||| || || || ||||||| || || |||| | | || ||||| || | Sbjct 963991 TATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTTAGGTCCTTCAGCAGATGTGGGT 964050 Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178 | || || ||||| |||||||||| ||||| || ||||| || || ||||| || | || Sbjct 964051 TTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 964110 Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238 | | || |||||||| || | ||||| || || || || || |||||||| |||| || Sbjct 964111 CGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAACA 964170 Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298 | | || || || | ||| ||| | || || || || || ||||| ||||| | Sbjct 964171 ACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 964230 Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358 | || | || || ||||| | |||||||| ||||| || |||| | || | Sbjct 964231 GCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTCACTGGGGAGC 964290 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418 | ||||| |||||||| || || |||| || | || || || || |||| || Sbjct 964291 CTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCCAGGGCAG 964350 Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478 | || || || ||||| || |||| |||| || || |||||| ||| ||||| | Sbjct 964351 CATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGAACTTTCAAATG 964410 Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538 ||||| | | || || ||||||||||| | ||||| || || || ||||| || || | Sbjct 964411 GATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCAATTGGCCTGT 964470 Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598 | | ||| || ||| | | ||||| |||| || || || |||||||| || || |||| Sbjct 964471 GGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATGATCTTAT 964530 Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658 |||||||||| |||| ||||||| || || || |||||||| | | | Sbjct 964531 TGAGATTTCTTACAATTACTTTAGTGACTGAGGCAAGCTTTTTGAAATCAAAGGTGCGTT 964590 Query 77659 CTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715 || ||||| ||||||| | ||| || || || | ||||| || ||||| |||| Sbjct 964591 CTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTACAGACGGCTACTTCATCTT 964650 Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775 | | | ||| | | ||||| || || | ||||| |||||||| ||||||| ||| | Sbjct 964651 TGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCT 964710 Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835 | ||||| ||||| | || || | || || || | || | || || || ||||| Sbjct 964711 GCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTG 964770 Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATCG 77893 |||| || || || || | | ||| || || || ||| || | || || || Sbjct 964771 TCTGAGACTCTATGATGGCATACCACAC--CTGCTGAGCCTTGACCACCCGCTTCACTCT 964828 Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953 | ||| ||||||| | || || ||| ||||| || || |||||| |||||||| Sbjct 964829 ACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAA 964888 Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013 |||||||| ||| | || |||||||| |||||||| | | | |||| ||||| Sbjct 964889 CCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCAT 964948 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 || || ||||| |||||||| ||| || || ||||| | || || || || || || Sbjct 964949 GAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACC 965008 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 || ||||| || || || ||||| || | | |||| | |||||||| || | || || Sbjct 965009 AGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAAT 965068 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | | || ||||||||||| || || || || | ||| | || ||||| || || Sbjct 965069 GGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTA 965128 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 ||||||| ||| || | || ||| || || | ||||||||||||| ||| |||||||| Sbjct 965129 CACTCTCAGCATCGGCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCC 965188 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 ||| | |||| |||| | || || || |||||||| ||||| || ||||| Sbjct 965189 TGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGC 965248 Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373 || |||||| ||| || || || || || || ||||||||| ||||| || || || Sbjct 965249 ACATTGTTTCAGTGTGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAA 965308 Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433 ||||| || | || | ||| ||||| || || | || ||||| ||||| || Sbjct 965309 GCAGCTGGAGAGCTGGGGTCTGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGT 965368 Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493 ||||| || ||||| || || ||||| || ||||| |||| ||||| || | | || Sbjct 965369 GAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTG 965428 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||||| || ||||| | ||| | ||| ||||| || | ||| || ||| ||| || Sbjct 965429 GATTCCGACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGAT 965488 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613 ||||| |||||| || || | |||||||| ||||| | ||||| ||||| || || Sbjct 965489 TTTCAGCAAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCCCT 965548 Query 78614 CTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTA--ACAATATCCATGACA 78671 || ||||| ||| |||| || || |||||| |||| | |||| ||| | | Sbjct 965549 ATCATAAATTATAGCAGAGTTGAGGCGGTCTTTG--TTTGCAAGGACAAGATCTA-GGGT 965605 Query 78672 GTAGT-TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATC 78730 || | || || || || || | |||| |||||| ||||||| || | ||| Sbjct 965606 GTCTTGGGAGATCATGGGGGAGTGGCGCTTATTTAAAGGATTGACATAGTGGAACAGATC 965665 Query 78731 TTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCT 78790 ||||| || ||||| || | || || || || || || ||||| || ||||| |||| Sbjct 965666 CTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGATTTGACACAGCAATTCG 965725 Query 78791 TGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGC 78850 |||||| || || |||||||| || || | || || ||||| || || ||||| || Sbjct 965726 TGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGC 965785 Query 78851 TAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGC 78910 | | || | ||| | ||| || || || | || || ||||| || || ||||| | Sbjct 965786 AAGTGTGTCCAGCTCCACAGTGGTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGT 965845 Query 78911 GATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGA 78970 ||||| || || |||||||| | || | |||||||| | || || ||||| Sbjct 965846 GATTTGTGTGGGGTCCACAAACTCCGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGA 965905 Query 78971 TGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 |||||||||||||| || || ||||| || ||||| Sbjct 965906 GGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 965943 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || || || |||||||| |||| |||| ||| | || || || |||||||||| Sbjct 963700 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 963759 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | || || || || |||||| | || || | || || ||||| || | | |||| Sbjct 963760 TTAGGGATTGGCTCTGGTCGATGTAGGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 963819 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017 | || | |||||||||| ||||| | | || || | ||||||||| Sbjct 963820 TCTGTGATATTTCCCAAACTGTTTTATATAACTGCTTTAAATCATCTGG 963868 >seq22773 Length=730387 Score = 132 bits (146), Expect = 7e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398 ||| || ||| || || ||| |||||||||||||||||| ||| |||||||||| Sbjct 299767 TCCTTTGCTAACAGGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTC 299826 Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458 ||| || || ||||| || | |||||||| || || ||||||| | ||||||| || Sbjct 299827 ACAGCTGGCCTCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTG 299886 Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 || || ||| ||||| |||||| | | ||||| ||||| || || | |||||||| Sbjct 299887 GGCCTCTTCACTTTCAAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAAC 299946 Query 77519 TCCAATACCAATAGGTCTATG 77539 || || ||||||||||| || Sbjct 299947 ACCGATCCCAATAGGTCTGTG 299967 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| || ||||| ||||||||||| |||||| ||| | || || || |||||||| | Sbjct 298782 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATATGAATGT 298841 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| ||||| || || || || | || || | ||||||||||| || | | ||| Sbjct 298842 TCAGAGACTGGCTCTGGTCAATATATGCACCACGGTCAGCCGCCATCTTAAGGACCATCT 298901 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||||| ||||||| | | || || | |||||| |||| Sbjct 298902 TCTGAGAGATTTCCCAAACAGTTTTGTAGAGCTGCTTTAGATCATCAGGAA 298952 Score = 100 bits (110), Expect = 4e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 || ||||||||||| ||||| || ||||| ||||||| ||| ||||| |||| ||| || Sbjct 300724 ACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTGC 300783 Query 78063 TCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121 || || || || || || || |||||| || || ||||| | | |||| |||||||||| Sbjct 300784 TCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATGG 300842 Query 78122 TTCTAGATATATTGCCATAACTCCAGGTC 78150 || || || | ||| | | ||||||| Sbjct 300843 CTCGAGGTAGACTGCAAATGCCCCAGGTC 300871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694442511638400