Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 708 0.0
seq22773 132 7e-26
>seq18889
Length=1054283
Score = 708 bits (784), Expect = 0.0
Identities = 1337/1958 (68%), Gaps = 13/1958 (1%)
Strand=Plus/Plus
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
||||||| || || || ||||||| || || |||| | | || ||||| || |
Sbjct 963991 TATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTTAGGTCCTTCAGCAGATGTGGGT 964050
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| || || ||||| |||||||||| ||||| || ||||| || || ||||| || | ||
Sbjct 964051 TTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 964110
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | || |||||||| || | ||||| || || || || || |||||||| |||| ||
Sbjct 964111 CGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAACA 964170
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
| | || || || | ||| ||| | || || || || || ||||| ||||| |
Sbjct 964171 ACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 964230
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| || | || || ||||| | |||||||| ||||| || |||| | || |
Sbjct 964231 GCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTCACTGGGGAGC 964290
Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418
| ||||| |||||||| || || |||| || | || || || || |||| ||
Sbjct 964291 CTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCCAGGGCAG 964350
Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACG 77478
| || || || ||||| || |||| |||| || || |||||| ||| ||||| |
Sbjct 964351 CATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGAACTTTCAAATG 964410
Query 77479 GATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTAT 77538
||||| | | || || ||||||||||| | ||||| || || || ||||| || || |
Sbjct 964411 GATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCAATTGGCCTGT 964470
Query 77539 GTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTAT 77598
| | ||| || ||| | | ||||| |||| || || || |||||||| || || ||||
Sbjct 964471 GGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATGATCTTAT 964530
Query 77599 TGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCAT 77658
|||||||||| |||| ||||||| || || || |||||||| | | |
Sbjct 964531 TGAGATTTCTTACAATTACTTTAGTGACTGAGGCAAGCTTTTTGAAATCAAAGGTGCGTT 964590
Query 77659 CTA---TAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAG 77715
|| ||||| ||||||| | ||| || || || | ||||| || ||||| ||||
Sbjct 964591 CTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTACAGACGGCTACTTCATCTT 964650
Query 77716 CGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTT 77775
| | | ||| | | ||||| || || | ||||| |||||||| ||||||| ||| |
Sbjct 964651 TGCTTGTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCT 964710
Query 77776 GTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAA 77835
| ||||| ||||| | || || | || || || | || | || || || |||||
Sbjct 964711 GCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTG 964770
Query 77836 TCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATCATAGATTTGTATCG 77893
|||| || || || || | | ||| || || || ||| || | || || ||
Sbjct 964771 TCTGAGACTCTATGATGGCATACCACAC--CTGCTGAGCCTTGACCACCCGCTTCACTCT 964828
Query 77894 CCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAA 77953
| ||| ||||||| | || || ||| ||||| || || |||||| ||||||||
Sbjct 964829 ACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAA 964888
Query 77954 TCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCAT 78013
|||||||| ||| | || |||||||| |||||||| | | | |||| |||||
Sbjct 964889 CCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCAT 964948
Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073
|| || ||||| |||||||| ||| || || ||||| | || || || || || ||
Sbjct 964949 GAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACC 965008
Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133
|| ||||| || || || ||||| || | | |||| | |||||||| || | || ||
Sbjct 965009 AGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAAT 965068
Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193
|| | | || ||||||||||| || || || || | ||| | || ||||| || ||
Sbjct 965069 GGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTA 965128
Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253
||||||| ||| || | || ||| || || | ||||||||||||| ||| ||||||||
Sbjct 965129 CACTCTCAGCATCGGCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCC 965188
Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313
||| | |||| |||| | || || || |||||||| ||||| || |||||
Sbjct 965189 TGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGC 965248
Query 78314 GCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAA 78373
|| |||||| ||| || || || || || || ||||||||| ||||| || || ||
Sbjct 965249 ACATTGTTTCAGTGTGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAA 965308
Query 78374 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGT 78433
||||| || | || | ||| ||||| || || | || ||||| ||||| ||
Sbjct 965309 GCAGCTGGAGAGCTGGGGTCTGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGT 965368
Query 78434 AAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATG 78493
||||| || ||||| || || ||||| || ||||| |||| ||||| || | | ||
Sbjct 965369 GAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTG 965428
Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553
||||| || ||||| | ||| | ||| ||||| || | ||| || ||| ||| ||
Sbjct 965429 GATTCCGACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGAT 965488
Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 78613
||||| |||||| || || | |||||||| ||||| | ||||| ||||| || ||
Sbjct 965489 TTTCAGCAAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCCCT 965548
Query 78614 CTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTA--ACAATATCCATGACA 78671
|| ||||| ||| |||| || || |||||| |||| | |||| ||| | |
Sbjct 965549 ATCATAAATTATAGCAGAGTTGAGGCGGTCTTTG--TTTGCAAGGACAAGATCTA-GGGT 965605
Query 78672 GTAGT-TGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATC 78730
|| | || || || || || | |||| |||||| ||||||| || | |||
Sbjct 965606 GTCTTGGGAGATCATGGGGGAGTGGCGCTTATTTAAAGGATTGACATAGTGGAACAGATC 965665
Query 78731 TTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCT 78790
||||| || ||||| || | || || || || || || ||||| || ||||| ||||
Sbjct 965666 CTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGATTTGACACAGCAATTCG 965725
Query 78791 TGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGC 78850
|||||| || || |||||||| || || | || || ||||| || || ||||| ||
Sbjct 965726 TGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGTCAGTGTGGCAGCAATCTCTGCAGC 965785
Query 78851 TAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTTCATGGC 78910
| | || | ||| | ||| || || || | || || ||||| || || ||||| |
Sbjct 965786 AAGTGTGTCCAGCTCCACAGTGGTCACTCCGCTGTACAGACCTTGGATCACCTTCATCGT 965845
Query 78911 GATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTTTCTAATACGAGA 78970
||||| || || |||||||| | || | |||||||| | || || |||||
Sbjct 965846 GATTTGTGTGGGGTCCACAAACTCCGCATTGAGCCCATAACAGAGCTTCTGGATTCGAGA 965905
Query 78971 TGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008
|||||||||||||| || || ||||| || |||||
Sbjct 965906 GGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 965943
Score = 84.2 bits (92), Expect = 3e-11
Identities = 120/169 (71%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| || || || |||||||| |||| |||| ||| | || || || ||||||||||
Sbjct 963700 TCCAACCATAAAAGTGCATGCTGGTCAATTTGCCATAGTTTGGCTCTGCAATATGAATAT 963759
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
| | || || || || |||||| | || || | || || ||||| || | | ||||
Sbjct 963760 TTAGGGATTGGCTCTGGTCGATGTAGGCACCGCGGTCGGCAGCCATCTTGAGTACAGTCT 963819
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGG 77017
| || | |||||||||| ||||| | | || || | |||||||||
Sbjct 963820 TCTGTGATATTTCCCAAACTGTTTTATATAACTGCTTTAAATCATCTGG 963868
>seq22773
Length=730387
Score = 132 bits (146), Expect = 7e-26
Identities = 150/201 (75%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 77339 TCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTC 77398
||| || ||| || || ||| |||||||||||||||||| ||| ||||||||||
Sbjct 299767 TCCTTTGCTAACAGGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTC 299826
Query 77399 ACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTG 77458
||| || || ||||| || | |||||||| || || ||||||| | ||||||| ||
Sbjct 299827 ACAGCTGGCCTCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTG 299886
Query 77459 TGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518
|| || ||| ||||| |||||| | | ||||| ||||| || || | ||||||||
Sbjct 299887 GGCCTCTTCACTTTCAAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAAC 299946
Query 77519 TCCAATACCAATAGGTCTATG 77539
|| || ||||||||||| ||
Sbjct 299947 ACCGATCCCAATAGGTCTGTG 299967
Score = 105 bits (116), Expect = 9e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| || ||||| ||||||||||| |||||| ||| | || || || |||||||| |
Sbjct 298782 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATATGAATGT 298841
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
||| ||||| || || || || | || || | ||||||||||| || | | |||
Sbjct 298842 TCAGAGACTGGCTCTGGTCAATATATGCACCACGGTCAGCCGCCATCTTAAGGACCATCT 298901
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| |||| |||||||||| ||||||| | | || || | |||||| ||||
Sbjct 298902 TCTGAGAGATTTCCCAAACAGTTTTGTAGAGCTGCTTTAGATCATCAGGAA 298952
Score = 100 bits (110), Expect = 4e-16
Identities = 113/149 (76%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
|| ||||||||||| ||||| || ||||| ||||||| ||| ||||| |||| ||| ||
Sbjct 300724 ACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTGC 300783
Query 78063 TCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGG 78121
|| || || || || || || |||||| || || ||||| | | |||| ||||||||||
Sbjct 300784 TCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATGG 300842
Query 78122 TTCTAGATATATTGCCATAACTCCAGGTC 78150
|| || || | ||| | | |||||||
Sbjct 300843 CTCGAGGTAGACTGCAAATGCCCCAGGTC 300871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694442511638400
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