Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq18889 738 0.0 seq22773 120 4e-22 seq19222 107 3e-18 >seq18889 Length=1054283 Score = 738 bits (818), Expect = 0.0 Identities = 1350/1963 (69%), Gaps = 23/1963 (1%) Strand=Plus/Plus Query 75654 TATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGAT 75713 ||||||| ||||| || ||||||| | || |||| | | || ||||| || | Sbjct 963991 TATTCTTCATCTCCTCGTTCCACAGCCCCCGTTCAGTTAGGTCCTTCAGCAGATGTGGGT 964050 Query 75714 TAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTT 75773 | ||||| ||||| |||||||||| ||||| || ||||| || || ||||| || | || Sbjct 964051 TTACAATCTGAAACTCTCCAGACAGGACTCTGCGTGTGTAGATGTTGCTGGTGTAGGCTT 964110 Query 75774 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | | || |||||||| || | ||||| || || || || || |||||||| |||| || Sbjct 964111 CGATGGACTCATTGTTGCCAAGTATTTGCGCTGTGGAGGCTGTGGGCATAGGGGCCAACA 964170 Query 75834 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 75893 | | || || || | ||| ||| | || || || || || ||||| ||||| | Sbjct 964171 ACAGGCTGTTCCTCACACCGTGTTTAGCAATCTTCTCCTTAAGCAGCTTCCAGTCCCAGA 964230 Query 75894 GATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATC 75953 | || | || || ||||| | |||||||| ||||| || | || | || | Sbjct 964231 GCTCAGTGGGCACCTTTTCCCACATGTCGTATTGCAGAATGCCCCTACTCACTGGGGAGC 964290 Query 75954 CATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCAC 76013 | ||||| || |||| |||||||||||| || | ||||| || ||||| | ||| Sbjct 964291 CTGGGTATGTCTCATAAGGCCCGTCCTTTTCTGCCAACTCGCAGCTTGCCTCCAGGGCAG 964350 Query 76014 CGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAG 76073 | || || || ||||| || |||| |||| || || |||||| ||| ||||| | Sbjct 964351 CATAGTAGATGGTTTCAAAGATCTGGATATTCAGCAGCTGGGCTTCAGAACTTTCAAATG 964410 Query 76074 GATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133 ||||| | | || || || |||||||| || ||||| || || || ||||| || || | Sbjct 964411 GATAACGCATGAGGATGAAGGCATCTGCAAGACCCTGCACACCGATCCCAATTGGCCTGT 964470 Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193 | | ||| || ||| | || ||||| |||| ||||| || ||||| || || || |||| Sbjct 964471 GGCGCTTGTTTGAATTCTCTGCTTCAGGAACTGGGTAGTAGTTAATGTCAATGATCTTAT 964530 Query 76194 TGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT 76253 |||||||||| |||| ||||||| || || || |||||||| | | | Sbjct 964531 TGAGATTTCTTACAATTACTTTAGTGACTGAGGCAAGCTTTTTGAAATCAAAGGTGCGTT 964590 Query 76254 CTA---TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--T 76308 || | ||| |||| || ||||| || || || | ||||| |||||||| |||| | Sbjct 964591 CTGGAGTAACATACATGTTGAGAGCAATTGAGGCCAAGTTACAGACGGCTACTTCATCTT 964650 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 || | | ||| | | ||||| ||||| | ||||| || ||||| || || | ||| Sbjct 964651 TGCTT--GTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATT 964708 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || ||||| ||||| ||||||| | || || || | | | || ||||| ||||| Sbjct 964709 CTGCTGGTTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTC 964768 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACT-CT-AGCTTTTATTATAGATTTGTAT 76486 |||| || || || || | | ||| || || || ||| || | | || | Sbjct 964769 TGTCTGAGACTCTATGATGGCATACCACAC--CTGCTGAGCCTTGACCACCCGCTTCACT 964826 Query 76487 CGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 | ||| ||||||| |||| || | | ||||| || || |||||| |||||| Sbjct 964827 CTACCCTCCTGTTCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCC 964886 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 || ||||| || ||| | ||||||||||| ||||| || | | | || | ||| Sbjct 964887 AACCCAGGGCACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTC 964946 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || || || ||||| |||||||| ||| || || ||||| | || | || || || Sbjct 964947 ATGAACAGGTCAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTA 965006 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || || ||||| || || || || || || | | |||| | |||||||| || | || Sbjct 965007 CCAGTGTTCTTCTTCAGCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAA 965066 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | |||||||||||||||| || || || || | ||| | |||||||| || Sbjct 965067 ATGGCAAAGGCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTG 965126 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 || ||||||| ||| || | || || || || ||||||||||||||| ||| |||||| Sbjct 965127 TACACTCTCAGCATCGGCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTT 965186 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 || || | |||| |||| | || || || |||||||| ||||||||| ||| Sbjct 965187 CCTGTTGATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGA 965246 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 ||||| |||||| ||||||||| ||||| || || || |||||| ||||| || || Sbjct 965247 GCACATTGTTTCAGTGTGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGG 965306 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 || ||||| || | || | ||| ||||| || |||| || ||||| |||||| Sbjct 965307 AAGCAGCTGGAGAGCTGGGGTCTGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGA 965366 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086 |||||||| || ||||| || || ||||| || ||||| |||| |||||||| | | Sbjct 965367 GTGAACCACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGAGTTG 965426 Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTT 77146 || ||||| ||||| || | ||| | ||| ||||| || || || | ||| ||| Sbjct 965427 TGGATTCCGACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTG 965486 Query 77147 ATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 77206 ||||||| |||||| || || | |||||||| ||||| | ||||| ||||| || Sbjct 965487 ATTTTCAGCAAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAAGAAATTGTAAGAAAAATCC 965546 Query 77207 CTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTA--ACAATATCCA--- 77261 || || ||||| ||| | || || || ||| | | |||| | |||| ||| | Sbjct 965547 CTATCATAAATTATAGCAGAGTTGAGGCGGTC--TTTGTTTGCAAGGACAAGATCTAGGG 965604 Query 77262 TGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATA 77321 || | ||| || || || || || | |||| |||||| ||||||| || | Sbjct 965605 TGTC-TTGG--GAGATCATGGGGGAGTGGCGCTTATTTAAAGGATTGACATAGTGGAACA 965661 Query 77322 AGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTA 77381 || ||||| ||||| || || | || || || || || || ||||| || || || | Sbjct 965662 GATCCTCCATGACGTCACTGAACACCTTCTTGGTCTCTTTATGGAGATTTGACACAGCAA 965721 Query 77382 TTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAG-GTGGCTGCTATTTCT 77440 ||| ||||| || || ||||| || || || | || || ||| ||||| || || ||| Sbjct 965722 TTCGTGCAGCCAGGATGGCATAATCTGGGTGCTTCGTGGT-CAGTGTGGCAGCAATCTCT 965780 Query 77441 GCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTC 77500 || || | || || | || | ||| || |||||| | || || ||||| || || ||| Sbjct 965781 GCAGCAAGTGTGTCCAGCTCCACAGTGGTCACTCCGCTGTACAGACCTTGGATCACCTTC 965840 Query 77501 ATGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATA 77560 || | |||| | || || |||||||| | || | |||||||| | || || Sbjct 965841 ATCGTGATTTGTGTGGGGTCCACAAACTCCGCATTGAGCCCATAACAGAGCTTCTGGATT 965900 Query 77561 CGAGATGTGATTTTATCAAACATGACATTCTCCTTACATCCAT 77603 ||||| |||||||||||||||||||| ||||| | ||||| Sbjct 965901 CGAGAGGTGATTTTATCAAACATGACGCGCTCCTGGCGTCCAT 965943 >seq22773 Length=730387 Score = 120 bits (132), Expect = 4e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 75934 TCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTC 75993 ||| |||||| || || ||| ||||||||| |||| || || | |||||||||| Sbjct 299767 TCCTTTGCTAACAGGAGAGCCAGCATATGTTTCATAAGGTCCATCTTGGGCAGCTAGTTC 299826 Query 75994 GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG 76053 || || ||||| || ||| | |||||||| || || ||||||| | || |||| || Sbjct 299827 ACAGCTGGCCTCCAAAGCAGCATAATAAATGGTCTCAAAAATCTGGATGTTGAGATACTG 299886 Query 76054 CGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAAC 76113 || || ||| ||||| |||||| | | ||||| || || || || || |||||||| Sbjct 299887 GGCCTCTTCACTTTCAAATGGATAACGCATGAGAATGAAGGCGTCCGCAAGACCCTGAAC 299946 Query 76114 TCCAATACCAATAGGTCTATG 76134 || || ||||||||||| || Sbjct 299947 ACCGATCCCAATAGGTCTGTG 299967 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| || ||||| ||||||||||| |||||| ||| | || || || |||||||| | Sbjct 298782 TCCACCCATAGAAGTGCATGCTTGTGAGTTTGCCATAGTTTGGTTCAGCAATATGAATGT 298841 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| ||||| || || || || | || || | ||||||||||| || | | ||| Sbjct 298842 TCAGAGACTGGCTCTGGTCAATATATGCACCACGGTCAGCCGCCATCTTAAGGACCATCT 298901 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | |||| |||||||||| ||||||| | | || || | |||||| |||| Sbjct 298902 TCTGAGAGATTTCCCAAACAGTTTTGTAGAGCTGCTTTAGATCATCAGGAA 298952 Score = 96.9 bits (106), Expect = 5e-15 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| |||| |||||| || || |||||||||||||| || || || || ||| Sbjct 301366 GTGCCAGCATTGAACAGTGTAGGGGAGGCGTGAGTGAACCATTTCTCTGAGAGCAGGTTG 301425 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || || ||||| |||| || || || || |||||| || ||||| || | ||| | | Sbjct 301426 TAGGTCTCAATGGCTGCGTCCATGTCTTGTTTATGAATCCCCACAGCCACTCTCATGAGC 301485 Query 77114 ATATGCTGAGG 77124 |||||||| || Sbjct 301486 ATATGCTGGGG 301496 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/129 (78%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 76598 ACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGT 76657 || ||||||||||| ||||| || ||||| ||||||| ||| ||||| |||| ||| | Sbjct 300724 ACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCTCTGC 300783 Query 76658 TCTTCATTTCCTGTATTCTT-TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGG 76716 || || || || || || || |||||| || |||||||| | | |||| |||||||||| Sbjct 300784 TCCTCTTTACCAGTGTTTTTCTTTAAG-TCAAGGAACTCAAACACATCAAAATGCCATGG 300842 Query 76717 TTCTAGATA 76725 || || || Sbjct 300843 CTCGAGGTA 300851 >seq19222 Length=928746 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| || || | ||| || ||| | || || ||||||||||| || | |||||| Sbjct 773893 TCATCTCTGCTGATAAGTTCATTGGAATAAGTAAGGCCAGGCATTAGACCCCTCTTTTTC 773834 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||| | || || || || |||||||| ||||| || || |||||||| || ||||| Sbjct 773833 AGCCAATAAATGGCAGCAAAGGATCCAGAGAAGAAAATTCCCTCTACAGCTGCAAATGCC 773774 Query 46774 ACAAGTCTCTCTCC 46787 |||| ||| || || Sbjct 773773 ACAATTCTTTCACC 773760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712702161619200