Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 664 0.0
seq25415 473 1e-128
>seq21827
Length=6214
Score = 664 bits (736), Expect = 0.0
Identities = 744/989 (75%), Gaps = 4/989 (0%)
Strand=Plus/Plus
Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254
|||||| | ||||| ||||||||| | ||||| || || | || |||||||| |
Sbjct 5030 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 5089
Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTC 183313
|||||| || || | ||| | ||||| |||| || || | || ||| | ||||| |
Sbjct 5090 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 183314 CTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACA 183373
|||| || || || || || || || ||||| ||| |||| || || | ||||||||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 183374 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCA 183433
| || || |||||||| || ||||| |||| || || || | || || || || |
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGA 5268
Query 183434 TCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAG 183493
| |||||||| || || | ||||| ||| | || || ||||||||||| | || | |
Sbjct 5269 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 5328
Query 183494 TCTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACC 183553
| | ||||| | |||| || || || |||||||||||||||||| | || ||
Sbjct 5329 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 5388
Query 183554 GTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCG 183613
|||| |||||||| |||||||| |||||| ||| || |||||||| ||||| || |
Sbjct 5389 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 5448
Query 183614 CTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTA 183673
|||| ||| || ||||||| | |||||||| ||| ||| |||||||| || || |
Sbjct 5449 CTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAA 5508
Query 183674 TCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACC 183733
|| ||| || || |||| ||| |||| |||||||| |||||||||||||| |||||||
Sbjct 5509 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 5568
Query 183734 CCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACG 183793
| || |||||| | || || |||||||| ||||| || || || |||||||| ||||| |
Sbjct 5569 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 5628
Query 183794 GTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTAT 183852
|||| |||| |||| || | | | || | |||||||| || ||| || || |
Sbjct 5629 GTTCCTTGGTAACTT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAA 5687
Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912
||||||| ||||||||||| ||||| |||||||| || || ||||||||||| || |||
Sbjct 5688 GGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTT 5747
Query 183913 GGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTT 183972
|| || |||||||||| |||||| || ||||| ||||||||| | |||||||||||
Sbjct 5748 GGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTA 5807
Query 183973 GCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTT 184032
||||||||||| || || || || ||||| |||||| | ||| ||||||||||||| |||
Sbjct 5808 GCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTT 5867
Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092
||| | |||||||| || |||||||| || | ||||| ||||||||||||| | ||
Sbjct 5868 AACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 5927
Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152
|||||||| || || ||||||||||| | || |||||||| ||||| || |||||
Sbjct 5928 ACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAAC 5987
Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGC 184181
||||| ||||||||||| || || |||||
Sbjct 5988 GCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 473 bits (524), Expect = 1e-128
Identities = 711/1005 (71%), Gaps = 4/1005 (0%)
Strand=Plus/Plus
Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030
||||||||||| | | ||||| || || ||||| || ||||| || || | || |
Sbjct 376 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 435
Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090
|||| ||| ||| | || | || || ||| |||| || ||||| ||||| || |
Sbjct 436 TTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCAT 495
Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG-TGCTAATTTTCTCACGGCAGCA 186149
|||||||||| || || || ||| || | || || ||| | || | | || || |||
Sbjct 496 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCCGCA 554
Query 186150 GTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 186209
|| || ||||||||| | | | | || ||| | | |||| ||||| ||||| |
Sbjct 555 GTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCA 614
Query 186210 CAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 186269
||||||||| | | || |||| ||| | || || || |||| |||||| || || |||
Sbjct 615 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCAC 674
Query 186270 GGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGG 186328
|| || || | || |||||||||||| | || || |||||| | ||| ||| |
Sbjct 675 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 734
Query 186329 TATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATT 186388
| | || || || ||||| || || || || ||||| || || || |||||| ||||||
Sbjct 735 T-TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATT 793
Query 186389 CCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGC 186448
||| || || || || || ||||| |||||||| || || ||||| || || ||
Sbjct 794 CCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGC 853
Query 186449 AATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCA 186508
|| ||| ||||| | | || ||||||| || || || ||||| ||||| ||||| ||
Sbjct 854 TATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCA 913
Query 186509 CATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTAC 186568
|||||||| || || || | | || | ||||||||| | || || ||||||| |||
Sbjct 914 TATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTAC 973
Query 186569 TGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATAC 186628
|||||||||||| | | ||||||||| || ||||| |||||| || || | |
Sbjct 974 CGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCC 1033
Query 186629 GACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTT 186688
|| |||| |||||||| ||||| |||||||| || ||| | || ||||| || |||||
Sbjct 1034 AACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTT 1093
Query 186689 CGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTAT 186748
|| |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || |
Sbjct 1094 TGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAAC 1153
Query 186749 GGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGA 186808
||| | |||| | | |||| | | ||||| || || || || ||||| |||||
Sbjct 1154 CGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGA 1213
Query 186809 CTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAA 186868
||| || |||||| | | ||||| || ||||| || || ||||| ||||| |||||
Sbjct 1214 CTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAA 1273
Query 186869 GAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGA 186928
||||| || || || |||||| | ||||| |||||||| | ||||| || |||||
Sbjct 1274 AAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGA 1333
Query 186929 AAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973
|||| || |||| ||||| || || | || | || ||||||||
Sbjct 1334 AAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 621867760567200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |