Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 672 0.0
seq25415 558 4e-154
>seq21827
Length=6214
Score = 672 bits (744), Expect = 0.0
Identities = 745/988 (75%), Gaps = 4/988 (0%)
Strand=Plus/Plus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
|||||||||||| |||| || || || ||| | || | || ||||| || || ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 163988 ATGATTCCCTGCC-TGCTGGCAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
|||| ||||| || | || | || ||| | ||| || || ||||| ||||| | ||| |
Sbjct 5091 ATGA-TCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || ||||| || || ||||| || |||| || || | ||||||||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || || |||||||| |||| ||| ||||| || || ||| |||| || ||||| |
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGA 5268
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| || | || |||||| | ||||| |||||||||| | || |||
Sbjct 5269 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 5328
Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285
| | ||||| | |||| | | ||| ||||||||||||||||||||| || ||
Sbjct 5329 TTCTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCC 5388
Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345
|||| |||||||| ||||||||| || ||||| || |||||||| || || || | ||
Sbjct 5389 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 5448
Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405
| || ||| || ||||||| | |||||||| || ||||| | |||||||| || |
Sbjct 5449 CTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAA 5508
Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465
||||||| || ||||||| |||| | || ||||| ||||||||||||||||| |||||||
Sbjct 5509 TCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACC 5568
Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525
| || || ||| | |||||||| ||||| || ||||| || || |||||||| ||||| |
Sbjct 5569 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 5628
Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585
|||| |||| |||||| || | | || ||||| |||||||| || || | |
Sbjct 5629 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 5688
Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645
|||||| || ||||| || |||||||||||||| ||||| || ||||| ||||| ||||
Sbjct 5689 GTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTG 5748
Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705
| || |||| |||||||| ||| ||||||||||| ||||| | ||||||||||| |
Sbjct 5749 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAG 5808
Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765
| || |||||||| || ||||| ||||| |||||| | || ||||||| ||||| || |
Sbjct 5809 CTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTA 5868
Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825
|| | || |||||||| |||||||| || | | ||| |||| |||||||| | || |
Sbjct 5869 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5928
Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885
||||||| || || ||||||||||| |||| |||||||| ||||| || ||||| |
Sbjct 5929 CCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACG 5988
Query 164886 CTCACAACTTCCCTCTCGACCTTGCTGC 164913
|||| ||||||||||| || || |||||
Sbjct 5989 CTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 558 bits (618), Expect = 4e-154
Identities = 722/992 (73%), Gaps = 4/992 (0%)
Strand=Plus/Plus
Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239
|| ||||||||||||||||| || ||||| || || | || ||||| ||| ||| |
Sbjct 393 AGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTC 452
Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299
|| | ||||||||| |||| || || || || || || |||||||| || ||| |
Sbjct 453 GCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTA 512
Query 165300 GCGAGTTCCTATCTTG-AGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGA 165358
|| ||||||||| | | ||| ||| ||||| | || || |||||||||||||| || |
Sbjct 513 GCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCTACTCCTGCTAA 571
Query 165359 CGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCG 165418
| | | || ||| | || | |||||||| ||||| | ||||| || || | ||
Sbjct 572 TAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCACAAGGAGATTTTACTCG 631
Query 165419 CTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTAT 165478
||||| ||| | || || || ||||||||||| || || ||||| || || | ||| ||
Sbjct 632 TTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGGCGCTTTCGGACTAAT 691
Query 165479 AGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATG 165537
|||||||||| | || || |||||||| || ||| || || | | || ||||| ||||
Sbjct 692 AGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATG 750
Query 165538 CTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGG 165597
| || || ||||| ||||| ||||| || || ||| ||| || || || ||||| || |
Sbjct 751 CAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAG 810
Query 165598 GACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGC 165657
| || || |||||||| || || || || || || || || || |||||| | |
Sbjct 811 GTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTATATTTCGATTCATCC 870
Query 165658 TCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAG 165717
|||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || |
Sbjct 871 TCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTG 930
Query 165718 GTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGT 165777
| | || |||| || |||| | || |||||||||| ||| ||||| |||||||| |
Sbjct 931 GGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTAT 990
Query 165778 ATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAA 165837
|||||||||||| ||||| || ||| || ||| | ||||| | || ||||
Sbjct 991 TTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAA 1050
Query 165838 CTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCA 165897
||||||| |||||||| |||||||| || ||||| || || ||||| ||||||| ||
Sbjct 1051 CTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 1110
Query 165898 ATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTT 165957
|||| |||||| | || ||||||||| | ||||| || || | || | |||| |||
Sbjct 1111 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTG 1170
Query 165958 CTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGA 166017
|| |||| | | ||||| || || ||||| ||||| ||||| || || |||||||| |
Sbjct 1171 CTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAA 1230
Query 166018 TTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATG 166077
| | || || || ||||| || ||||| || ||||| || ||||| || ||| | || |
Sbjct 1231 TCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACG 1290
Query 166078 AAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTG 166137
|||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||||||
Sbjct 1291 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 1350
Query 166138 AAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
| || || | || | || ||||| ||||||
Sbjct 1351 AGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 1382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557472744079200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |