Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq21827 628 3e-175 seq25415 544 1e-149 >seq21827 Length=6214 Score = 628 bits (696), Expect = 3e-175 Identities = 731/986 (74%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| |||||| |||||||| || | || ||||| || || || Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || || ||||| ||||| | ||| || Sbjct 5091 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCT 5150 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | ||||| ||||| Sbjct 5151 CCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 5210 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || |||||||| || | || |||| || || ||| | || || || || || Sbjct 5211 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGATA 5270 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| || | ||||||||||| ||||| |||||||||| | || |||| Sbjct 5271 TGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 5330 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | ||||| | | || | | ||| |||||||||||||||||| | | ||| Sbjct 5331 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 5390 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 |||||||||||||||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 5391 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 5450 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || |||| || |||| ||||| || ||||||| ||||||||| || ||| Sbjct 5451 GTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTAGGAATC 5510 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| |||| | || ||||||||||||||||||||||| |||||||| Sbjct 5511 TCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 5570 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | || || || || || || || || || || || || || ||||| ||| Sbjct 5571 TTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGT 5630 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | | || ||||| ||| | || | |||||||| || || || || || | ||| Sbjct 5631 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 5690 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||||||||| ||||| |||||||| ||||| || ||||| ||||| || || Sbjct 5691 TACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTATTTTGGC 5750 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| ||||||||||| ||||| | ||||||||||| || Sbjct 5751 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCT 5810 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || |||||||| || || || |||||||| ||| | ||| | ||| ||||| || ||| Sbjct 5811 GCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTTAAC 5870 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 | || |||||||| |||||||| || | | ||| |||| |||||||| | || ||| Sbjct 5871 TTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5930 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || || ||||||||||| | || |||||||| ||||| || ||||| ||| Sbjct 5931 TGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGTAACGCT 5990 Query 170312 CACAACTTCCCTCTCGACCTCGCTGC 170337 || ||||||||||| || || ||||| Sbjct 5991 CATAACTTCCCTCTAGATCTAGCTGC 6016 >seq25415 Length=1491 Score = 544 bits (602), Expect = 1e-149 Identities = 731/1011 (72%), Gaps = 6/1011 (1%) Strand=Plus/Plus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 ||||||||||| | | || || || || ||||| || ||||| || || | || | Sbjct 376 TGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCT 435 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||| ||| | || | || || ||| |||| || || || ||||| || | Sbjct 436 TTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCAT 495 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAATTTCCTTACAGCGGCT 170783 |||| ||||| ||| | |||||||| || | ||||| ||| || ||| | || || || Sbjct 496 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCA 554 Query 170784 GTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 170843 || || || |||||| || | | | || ||| | | |||| ||||| ||||| | Sbjct 555 GTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGGCCCTGAAGCA 614 Query 170844 CAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCAC 170903 || || ||||| || |||| ||| | || || || |||| |||||| || || ||| Sbjct 615 CAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCAC 674 Query 170904 GGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGG 170962 || || || | || |||||||||||| | || || |||||| | ||| ||| | Sbjct 675 GGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCA- 733 Query 170963 GATTA-GACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGT 171021 |||| |||| || ||||||||||| ||||| ||||| || || || ||||| || | Sbjct 734 -ATTACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTAT 792 Query 171022 TCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAG 171081 |||| || ||||| || || ||||| |||||||||| || || ||||| || || | Sbjct 793 TCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGG 852 Query 171082 CAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTC 171141 | || || || ||| | ||||| | ||||| || || || |||||| |||| ||||||| Sbjct 853 CTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTC 912 Query 171142 ATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTA 171201 |||||||||| ||||| || | | |||| ||| |||| | || |||||||||| || Sbjct 913 ATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTA 972 Query 171202 CAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACA 171261 | ||||| |||||||| | ||||||||||||| ||||| || || ||| ||| || Sbjct 973 CCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACC 1032 Query 171262 CGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTT 171321 | ||||| | ||||| || ||||| |||||||| ||||| || || ||||| || || | Sbjct 1033 CAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCT 1092 Query 171322 TTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCA 171381 |||| | || || |||||| |||||||| |||||||||||| | ||||| || || | Sbjct 1093 TTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAA 1152 Query 171382 TGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATG 171441 ||| | ||| | ||| ||| || | | ||||| || || ||||| | || |||| Sbjct 1153 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATG 1212 Query 171442 ATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCA 171501 | ||||| |||||| || | ||||| |||||||| || || ||||| ||||| |||| Sbjct 1213 ACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCA 1272 Query 171502 AGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATG 171561 | || || || || || |||||| ||||||| |||||||| | ||| || || |||| Sbjct 1273 AAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 1332 Query 171562 AAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 ||||| || | ||||| ||||| |||||||| ||||| || || |||| || Sbjct 1333 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 1383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592005491371200