Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq22308 150 3e-31
seq988 104 3e-17
>seq22308
Length=220414
Score = 150 bits (166), Expect = 3e-31
Identities = 173/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 8315 ACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCT 8374
|||||| | || ||||| ||| | | || | |||| ||| |||| |||||
Sbjct 57183 ACGTTGTTGCACACTAGCCTCTGCAGCGAGGCCGTGTTGATGATGTCGAAGCCCACCGGG 57124
Query 8375 CCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCT 8434
|| ||||| ||||| ||||||||||| | |||||||||||| |||| |||||||||||
Sbjct 57123 CCTCCGAAAGTGCTTGGCTTCCAGTATTCAGGGGAGCAGATGGCGTTTCCCATGAGGCCT 57064
Query 8435 TTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGG 8494
||||||||||| || || |||| || | ||| |||| ||||| ||||||| | | |
Sbjct 57063 TTGAGGGAGAAGGGGGCACCCATTTCCACCATGGTCTCCCCGAAAATGGCGTCCTGTCTG 57004
Query 8495 GGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTA 8547
||||| || |||| | || | |||||||||||| || || |||| ||| ||
Sbjct 57003 GGCTTCTCGACCAGCAGACCCGGGTACAGCTCCACGGCATCCACGTGTCCATA 56951
Score = 104 bits (114), Expect = 3e-17
Identities = 168/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||||| || |||||||| | ||| || ||| | || || | | || ||
Sbjct 54366 ATGAGTCTTGTAGTCTGGAATATCCTCTCATCGTCCCAGTGAGGGTGGACCTCCTTTAGT 54307
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
||||| || || | |||||| || | |||||||| || ||||||||||||||||||||
Sbjct 54306 ACATCACATACGCGGTTGTGCTCACGCAGCCAGATCGTAGCGTACATCATGAGCCCAGGG 54247
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
||||||||||| || || || || || || | ||| | || | || | || ||
Sbjct 54246 ACCAGGCCAAAGGCTTCGTGCCCCACTGCAAACCGCTGGGACTCTGCGACGTGTGGGGGG 54187
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
||| ||||| ||| ||||| | || | ||||||||||| ||||| | | ||||
Sbjct 54186 TAGTGCATGTCCACACCAACGTCCCTCACTGTTGGGGGATACATCTCACCATTCAGCATC 54127
Query 9484 TG 9485
||
Sbjct 54126 TG 54125
Score = 84.2 bits (92), Expect = 3e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 9926 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 9985
|| ||||||||||| | ||||| || || || ||| | | ||||||| | || ||
Sbjct 52465 GGTGTTGGACAATCCTCCGGAACAGGGGGGAGTGTCCGGGTGAAATAGGACAAGTTTGAA 52406
Query 9986 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGGAGGGCTGTCAATCAAA 10045
| |||||||||||| ||| |||| ||||||||||| | || ||||||||||||| |
Sbjct 52405 TAGGCTTCCCAGCTTTTGTACCCGTAATCCGCGTTGTAGGTTGGTGGGCTGTCAATCATA 52346
Query 10046 T 10046
|
Sbjct 52345 T 52345
>seq988
Length=132825
Score = 104 bits (114), Expect = 3e-17
Identities = 120/162 (74%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 8323 ACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAA 8382
||| ||||| || | |||||| || ||||||| | ||| ||| ||||| || ||
Sbjct 111260 ACACACTAGTTTTTGCAGAGTTGCACTTTTGACGACCTGGAAGCCCGTCTCTCCTCCAAA 111319
Query 8383 GGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGA 8442
|||||||||||||||||| |||||||||| | | || ||| | ||||| || ||
Sbjct 111320 CGTGCTGGGCTTCCAGTACTCCGGGGAGCACAGGGGATTTCCCAGCAAACCTTTCAGAGA 111379
Query 8443 GAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGC 8484
||| ||||| |||| ||| | || ||||| || ||||||||
Sbjct 111380 GAAAGGAGCACCCATCTCCACCATACTCTCCCCAAAGATGGC 111421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716643277382400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |