Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq4762 95.1 9e-15 >seq4762 Length=89736 Score = 95.1 bits (104), Expect = 9e-15 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || ||||| ||||| || || ||||||||||| |||||||| || || || |||||||| Sbjct 89013 TTGTATTCAGCTCCAAAGTGTCTCCACTGAAAGCCATACACTGGGCCCAGGTCTCCTTCC 89072 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 || | ||| ||| ||| |||||| | ||| || || ||||| |||||||| || Sbjct 89073 TCACGATCAGTAAAGCCATTTTTATCCAGAAACTCCCTGGAGCCATTAGCATCCCAGATT 89132 Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTG 102181 |||||| | ||| ||||||||| Sbjct 89133 CTCACGCCCTTTTGTGACAGCTCTTTG 89159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360929548366307