Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9986 95.1 2e-14 >seq9986 Length=217236 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || ||||||||||| ||||||||||||||| ||| | || || || ||||||||| Sbjct 86594 GTGGCGTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGGTCTTTTGCTTCTATTTTCTGG 86653 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 | ||||| || || | ||||||| ||||||| ||||||||| |||| Sbjct 86654 CTAAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTCAT 86703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988657707009435