Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq19305 93.3 6e-14 >seq19305 Length=42216 Score = 93.3 bits (102), Expect = 6e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 97179 CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAG 97238 |||||| | |||||| | | ||||| |||||| || || || ||||| || |||||| Sbjct 24784 CTGTGGCATGCCATCATTGAGTCTCAGACAGAGACCGGCACACCCTACATGCTTTACAAG 24725 Query 97239 GATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTG 97298 ||| || |||||||| |||||||| | || ||||||||||||| | || || Sbjct 24724 GATGCCTGCAATCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAATCCAGTAACTTG 24665 Query 97299 TGCACGGAAATTGTAGAGTACGCC 97322 ||||| || || ||||||||| || Sbjct 24664 TGCACAGAGATAGTAGAGTACACC 24641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740382455475320