Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq23339 87.8 2e-12 >seq23339 Length=10106 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883 ||| ||||||||| ||| | ||||| |||||| ||||||||||| || || || | Sbjct 3253 CAAGCGACACCATTGAGAATGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCTG 3312 Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGAAAC-GTCAGCGA 26941 | || || || | || | | |||||||| || |||||| || | || ||| ||| Sbjct 3313 ACCAGCAGAGGTTGATCTTTGCTGGCAAACAGCTGGAAGATGGACGCACACTGTC--CGA 3370 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| |||||||| ||||| || || | || ||||| ||| | || |||||||| Sbjct 3371 CTACAACATTCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTCAGAGGAGG 3424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478225279513040