Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq72329 89.7 1e-12 seq4762 89.7 1e-12 >seq72329 Length=2074 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111672 ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA 111731 |||||| | || || || ||| | |||||||||||||| ||||| | | || Sbjct 1041 ATGGCATTGCCCCCCTGCCATGCGTTATGCCAGTTTTATGTGTCAGACGGTGAGTTGTCG 982 Query 111732 TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGT 111791 ||||| |||| ||||| |||| ||| |||||||| ||||| || || || ||||| || Sbjct 981 TGCCAGCTGTACCAGCGCTCTGGTGACATTGGTCTGGGTGTGCCATTCAACATTGCCAGC 922 Query 111792 TACGCACTACTTAC 111805 ||||||||||| || Sbjct 921 TACGCACTACTCAC 908 >seq4762 Length=89736 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111672 ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA 111731 |||||| | || || || ||| | |||||||||||||| ||||| | | || Sbjct 82916 ATGGCATTGCCCCCCTGCCATGCGTTATGCCAGTTTTATGTGTCAGACGGTGAGTTGTCG 82857 Query 111732 TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGT 111791 ||||| |||| ||||| |||| ||| |||||||| ||||| || || || ||||| || Sbjct 82856 TGCCAGCTGTACCAGCGCTCTGGTGACATTGGTCTGGGTGTGCCATTCAACATTGCCAGC 82797 Query 111792 TACGCACTACTTAC 111805 ||||||||||| || Sbjct 82796 TACGCACTACTCAC 82783 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111672 ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA 111731 |||||| | || || || ||| | |||||||||||||| ||||| | | || Sbjct 87249 ATGGCATTGCCCCCCTGCCATGCGTTATGCCAGTTTTATGTGTCAGACGGTGAGTTGTCG 87190 Query 111732 TGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGT 111791 ||||| |||| ||||| |||| ||| |||||||| ||||| || || || ||||| || Sbjct 87189 TGCCAGCTGTACCAGCGCTCTGGTGACATTGGTCTGGGTGTGCCATTCAACATTGCCAGC 87130 Query 111792 TACGCACTACTTAC 111805 ||||||||||| || Sbjct 87129 TACGCACTACTCAC 87116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302133605230574