Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq9986 87.8 2e-12 >seq9986 Length=217236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| ||||| |||||||| ||||||||||| || | || ||||||||||| ||| Sbjct 85088 ATGTAGGTATCAATTAACAGGCTGTACATTTCAGAGTGAATGTTTTCCATTGCAATCTGG 85029 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 || || ||||| || | ||||| || | || ||||| |||| ||||| ||| || Sbjct 85028 AAACCATAGAAGCAACGGGCTTCTGTCACTTGGACTTCCTGAGTAAATCGCTCAAC 84973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| ||||| |||||||| ||||||||||| || | || ||||||||||| ||| Sbjct 85963 ATGTAGGTATCAATTAACAGGCTGTACATTTCAGAGTGAATGTTTTCCATTGCAATCTGG 85904 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 || || ||||| || | ||||| || | || ||||| |||| ||||| ||| || Sbjct 85903 AAACCATAGAAGCAACGGGCTTCTGTCACTTGGACTTCCTGAGTAAATCGCTCAAC 85848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556352267756680