Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq19305 95.1 1e-14 seq9456 95.1 1e-14 seq59258 93.3 5e-14 seq41466 93.3 5e-14 seq33171 93.3 5e-14 seq1499 93.3 5e-14 seq159 93.3 5e-14 seq9986 87.8 2e-12 seq10215 82.4 9e-11 >seq19305 Length=42216 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 ||| ||||| | |||||||| |||| ||||||||||||| ||||| || || ||||| Sbjct 22916 GTAAATGTTGCTAGTGTAGGGCTCGATTGACTCATTGTTGCCCAGGATCTGAGCTGTGGA 22975 Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 ||| ||||||||||| |||| || |||||||| || | ||| Sbjct 22976 AGCAGTGGGCATGGGGGCCAGCAGCAGACTGTTACGCACACC 23017 >seq9456 Length=13866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 68/76 (89%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT- 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 13670 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTA 13611 Query 136776 -TGG-GAACAGCTTTT 136789 ||| ||||| |||| Sbjct 13610 CTGGCCAACAGGTTTT 13595 >seq59258 Length=3541 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 3128 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 3070 >seq41466 Length=5528 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 5031 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 4973 >seq33171 Length=3366 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 2459 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 2401 >seq1499 Length=35873 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 29739 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 29681 >seq159 Length=233449 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 18195 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 18253 >seq9986 Length=217236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 |||||| ||||| |||| |||||||||||||||||||| ||||||||||| || || Sbjct 86704 GATGAGTTCATTGGAGAAGGTGAGTCCAGGCATGAGTCCTCTCTTCTTTAGCCAGAAAAT 86645 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 | | |||| |||||||||||||| || ||||| Sbjct 86644 AGAAGCAAAAGACCCAGAAAAGAAGATTCCTTCCAC 86609 >seq10215 Length=77808 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 119528 GATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGAT 119587 |||||| ||||| | || ||||||||||| || ||||||||||| | ||| |||| Sbjct 33838 GATGAGTTCATTGGAGTAGGTGAGTCCAGGCATCAGGCCTCTTTTCTTCAACCAGTAGAT 33897 Query 119588 GGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTC 119647 |||| ||| |||||| ||||||||||| || || || ||||| | ||| ||||| Sbjct 33898 GGCAGCAAACGATCCAGAGAAGAAGATGCCTTCAACCGCAGCAAAAGCTACTAGTCGCTC 33957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588438139754600