Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq4762 100 2e-16 >seq4762 Length=89736 Score = 100 bits (110), Expect = 2e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 |||||| |||| || ||||| || || |||||||| || || ||||| || |||||||| Sbjct 89006 CATGTCATTGTATTCAGCTCCAAAGTGTCTCCACTGAAAGCCATACACTGGGCCCAGGTC 89065 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||| || || | | ||||| | || |||| ||| || ||||| || || || || Sbjct 89066 TCCTTCCTCACGATCAGTAAAGCCATTTTTATCCAGAAACTCCCTGGAGCCATTAGCATC 89125 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||| | || ||||| | || |||||||||| ||||| || || Sbjct 89126 CCAGATTCTCACGCCCTTTTGTGACAGCTCTTTGGCATTTGTTGAACC 89173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408253774167461