Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq15285 86.0 1e-11 >seq15285 Length=16418 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 58378 AGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCAT 58437 ||| || |||||||||| | | || ||||| | || ||| | || || ||||||||||| Sbjct 5255 AGCCTTGTGGTGGTACTTTGTTTCCAAAGGTGTGGAGTACCTCGACACTGTGTTTTTCAT 5314 Query 58438 ACTTA-GGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496 |||| |||| ||||| || || | ||||| | || |||||||| || | || |||| Sbjct 5315 -CTTACGGAAGAAGTTCAACCAAATCAGCTTCTTGCATGTATATCACCACTGCACCATGT 5373 Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||| | | ||| | || || |||||| | || || || ||| Sbjct 5374 TCACTCTGTGGTGGATTGGCATCAAATGGGTCGCCGGTGGACAG 5417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902586193599520