Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2134 141 9e-29 seq23339 93.3 4e-14 >seq2134 Length=159448 Score = 141 bits (156), Expect = 9e-29 Identities = 156/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || |||| | | | || || | || Sbjct 28745 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCTTCCAACT 28803 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 28804 GTTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTGGATCT 28863 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| |||||| ||||||| || || | |||| ||| ||||| | Sbjct 28864 TGGCCTTGACATTCTCAATGGTGTCGCTGGGCTCAACCTCAAGTGTGATGGTCTTGCCAG 28923 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || ||||||||||| Sbjct 28924 TCAGCGTCTTCACAAAAATCTGCAT 28948 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 26693 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 26751 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 26752 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 26811 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 26812 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 26871 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 26872 TCAAGGTCTTTACGAAGATCTGCAT 26896 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 26921 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 26979 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 26980 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 27039 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 27040 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 27099 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 27100 TCAAGGTCTTTACGAAGATCTGCAT 27124 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 27149 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 27207 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 27208 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 27267 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 27268 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 27327 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 27328 TCAAGGTCTTTACGAAGATCTGCAT 27352 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 27377 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 27435 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 27436 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 27495 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 27496 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 27555 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 27556 TCAAGGTCTTTACGAAGATCTGCAT 27580 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 27605 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 27663 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 27664 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 27723 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 27724 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 27783 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 27784 TCAAGGTCTTTACGAAGATCTGCAT 27808 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 27833 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 27891 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 27892 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 27951 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 27952 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 28011 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 28012 TCAAGGTCTTTACGAAGATCTGCAT 28036 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 28061 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 28119 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 28120 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 28179 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 28180 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 28239 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 28240 TCAAGGTCTTTACGAAGATCTGCAT 28264 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 28289 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 28347 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 28348 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 28407 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 28408 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 28467 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 28468 TCAAGGTCTTTACGAAGATCTGCAT 28492 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 28517 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGTGTGCGACCA-TCTTCCAACT 28575 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || || ||||||||||| ||||| |||||||||||||| ||||| Sbjct 28576 GTTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 28635 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 28636 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 28695 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 28696 TCAAGGTCTTTACGAAGATCTGCAT 28720 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || ||| ||| | || || | || Sbjct 26237 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCA-TCTTCCAACT 26295 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||| ||| | || | ||||||||||| ||||| |||||||||||||| ||||| Sbjct 26296 GTTTGCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCT 26355 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | ||||| |||||| | || ||||| || | |||| ||| ||||| | Sbjct 26356 TGGCCTTTACGTTCTCAATGGTGTCGCTTGGTTCCACCTCAAGAGTGATGGTCTTGCCAG 26415 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 26416 TCAAGGTCTTTACGAAGATCTGCAT 26440 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || ||||| ||| || |||| | | | || || | || Sbjct 26465 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGTCCA-TCTTCCAACT 26523 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || | || || ||||||||||| || || |||||||||||||| ||||| Sbjct 26524 GTTTACCAGCAAAGATCAGACGCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCT 26583 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||||| |||||| ||||||| || || | |||| ||| ||||| | Sbjct 26584 TGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCAAGAGTGATGGTCTTGCCAG 26643 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || |||||||| |||||||| Sbjct 26644 TCAAGGTCTTTACGAAGATCTGCAT 26668 >seq23339 Length=10106 Score = 93.3 bits (102), Expect = 4e-14 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| || ||| | | | || || ||||| |||| Sbjct 3395 GGTGGACTCTTTCTGAATGTTGTAGTCGGACAGTGTGCGTCCA-TCTTCCAGCTGTTTGC 3337 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || ||||||||| || || |||||||| ||||| ||||||| || Sbjct 3336 CAGCAAAGATCAACCTCTGCTGGTCAGGGGGAATGCCTTCTTTGTCCTGGATCTTTGCCT 3277 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTC 133609 ||| | ||||| |||||| | ||||| Sbjct 3276 TGACATTCTCAATGGTGTCGCTTGGCTC 3249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482979334082680