Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq10820 125 8e-24 >seq10820 Length=176331 Score = 125 bits (138), Expect = 8e-24 Identities = 234/344 (68%), Gaps = 0/344 (0%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| || | || |||| |||||| ||||| |||||||||| |||| | ||| | Sbjct 151129 GCCAGCTCCTTTGGAGACGGAAAGTCGTCGACGTGGATGAAAGCGTTTCCCTGCACGAAG 151070 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || | || ||||| || | || ||||| || | |||||| | || | ||| | Sbjct 151069 TTCTGATAGTTCTCCCTAGGTGGCCCGAGCACCACGGGTACGGTGCCGACTGAAAGTGGG 151010 Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125 ||| | ||| || || || ||||| |||| | ||||||||| ||||| | ||| ||| Sbjct 151009 TTGTACAATTTCTCAGTGATGTAGTCTTTGTGAATGGAGTTCTCGAACGCCAAATAAAAT 150950 Query 177126 TTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTC 177185 |||||| | | | |||| |||| | |||| || || || || | | | Sbjct 150949 TTACAGCTGGCAATTGTGGGGAAATAGTCCTGGTCGGAAATGTACTCGCCGAAAGCCTGT 150890 Query 177186 CCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCACGTGG 177245 |||||| |||| | || ||||| || || || ||||||| || || ||||| Sbjct 150889 CCGTATGCATGAACCTCGATGTGCTTGTACAGTTCGTTGTAGTATTTCACCCTGACGTGA 150830 Query 177246 TCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 || ||||||||||||||||| |||||||| | |||| |||| Sbjct 150829 TCTGGGTTCCAATTGCTGACGATCCAGCAAATGAGCTTGTTCTT 150786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577903768667200