Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9986 87.8 4e-12 >seq9986 Length=217236 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 131858 AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATC 131917 ||| | || || |||||| || ||||| || |||||||| || |||| | |||| Sbjct 86588 AGAGTGGTGGCGTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGGTCTTTTGCTTCTATT 86647 Query 131918 TTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCG 131977 || ||||| |||||| | ||| | |||||||||||| | || |||||| || ||||| Sbjct 86648 TTCTGGCTAAAGAAGAGAGGACTCATGCCTGGACTCACCTTCTCCAATGAACTCATCAGC 86707 Query 131978 AGAGATGA 131985 |||||||| Sbjct 86708 AGAGATGA 86715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185701892408777