Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2134 95.1 3e-14 >seq2134 Length=159448 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || |||||| | || |||||| ||||| | || |||||| Sbjct 26416 ACTGGCAAGACCATCACTCTTGAGGTGGAACCAAGCGACACCATTGAGAACGTAAAGGCC 26357 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| || ||| || | | |||||||| || || Sbjct 26356 AAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTTTGATCTTCGCTGGCAAA 26297 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| | ||| || |||| |||||| ||||||| ||||| || || || Sbjct 26296 CAGTTGGAAGATGGTCGCACTCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 26237 Query 206374 CTTGTTTTGAGACTTCG 206390 |||||| || | ||||| Sbjct 26236 CTTGTTCTGCGTCTTCG 26220 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || ||||| ||| || ||| || | || |||||||| || || Sbjct 28864 AAGATCCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGATCTTCGCTGGTAAA 28805 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||||||||||||||| | || || |||| |||||| ||||||| ||||| || || || Sbjct 28804 CAGTTGGAAGATGGACGCACGCTGTCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 28745 Query 206374 CTTGT 206378 || || Sbjct 28744 CTGGT 28740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180714565134497