Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq17329 91.5 2e-13 >seq17329 Length=152705 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| |||| || | ||||| |||||||||| |||||||||||| | |||||| ||| Sbjct 80915 GGTTTGACTGACACAGTCCGCTTCTACCAGGCCTCCACCAGTGAGCTCTATGGGAAAGTA 80974 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGG 161403 || || | || |||||||| || || || || ||||||||||| || ||||| Sbjct 80975 CAGGAAATTCCCCAGAAAGAGACTACGCCATTTTACCCACGATCCCCTTATGG 81027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729263019165160