Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq19305 84.2 2e-11 >seq19305 Length=42216 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703 ||| |||| |||||| |||| ||| || | ||| | ||||| ||||||||||||||| | Sbjct 25500 TTCCACTCTCTTCATGAACAGATCAGGGATCCAGAGGGCGTAAAACAGATCTCTAGCTCT 25559 Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 | || ||| | || || | ||||| | | || ||||| |||||||| |||||| Sbjct 25560 CTGTTCCTCTTTTCCAGTATTCTTTTTGAGCTCTAGGAAGTCAAAAATGTCAAAATGCCA 25619 Query 131764 GGGTTCCAAATACA 131777 ||| |||| |||| Sbjct 25620 GGGCTCCAGGTACA 25633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424556045979384