Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq19305 93.3 5e-14 >seq19305 Length=42216 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/138 (75%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC---TTAATCGT 111321 |||||||||| |||||||||| || ||||| || ||||| ||| || || || Sbjct 24629 CTCATCCTTACTGGTGTACTCTACTATCTCTGTGCACAAGTT---ACTGGATTTGATGGT 24685 Query 111322 CCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGT 111381 |||| |||| ||||| ||||| ||||| ||||||||||| ||||||||||| || Sbjct 24686 GCCCAGGTTCTGCTGGTTGCTCTTGCGATTGCAGGCATCCTTGTAAAGCATGTAGGGTGT 24745 Query 111382 CCCCGTCTCCGTCTGTGA 111399 || ||||| ||||| || Sbjct 24746 GCCGGTCTCTGTCTGAGA 24763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627458473327200