Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq72 158 1e-33 >seq72 Length=2559699 Score = 158 bits (174), Expect = 1e-33 Identities = 143/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||| ||||| | ||| || | ||||||||| || || | ||||||||| |||||||| Sbjct 2421893 CTTGAGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAA 2421834 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 ||||| ||||| |||||||| | ||||||||||||||||| || || ||||||||| | Sbjct 2421833 AGGCACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTC 2421774 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925 ||||||||||| || ||| |||||||| ||||| |||||| ||| ||||| || Sbjct 2421773 GCAGACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGATGGGGAGGTCTGC 2421714 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/156 (73%), Gaps = 8/156 (5%) Strand=Plus/Minus Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093 |||| |||| | || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 2420988 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 2420929 Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGT 146149 |||||| | | | |||| || | |||||||| |||||||||||||| | Sbjct 2420928 CTCCTCCCTCT----CTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCAT 2420873 Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185 |||||||||| || || || | || ||||| |||| Sbjct 2420872 CCCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGG 2420837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590047406799400