Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq72 158 1e-33
>seq72
Length=2559699
Score = 158 bits (174), Expect = 1e-33
Identities = 143/180 (79%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
|| ||| ||||| | ||| || | ||||||||| || || | ||||||||| ||||||||
Sbjct 2421893 CTTGAGTCCCGTAATGTGTGCAATCATGTAGGTGAGAAGTGCGTAGCTGGCGATGTTGAA 2421834
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865
||||| ||||| |||||||| | ||||||||||||||||| || || ||||||||| |
Sbjct 2421833 AGGCACGCCCAGACCCATGTCGGCGGAGCGCTGGTACAGCTGACAAGACAGCTCCCCGTC 2421774
Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGC 145925
||||||||||| || ||| |||||||| ||||| |||||| ||| ||||| ||
Sbjct 2421773 GCAGACGTAGAACTGACAGAGGGCATGGCAGGGGGGCAGCGCCATGATGGGGAGGTCTGC 2421714
Score = 91.5 bits (100), Expect = 2e-13
Identities = 114/156 (73%), Gaps = 8/156 (5%)
Strand=Plus/Minus
Query 146034 GTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC 146093
|||| |||| | || || ||||||||||| ||||| || || || || ||||| |||||
Sbjct 2420988 GTCCTTGTACTCTGCACCAAAGTGCCTCCATTGGAAACCATACACAGGTCCCAGATCCCC 2420929
Query 146094 GGGCTCCCTGTGCCCCAGCCCGGCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGT 146149
|||||| | | | |||| || | |||||||| |||||||||||||| |
Sbjct 2420928 CTCCTCCCTCT----CTGTGAAGCCCAGGTTGTCCAGGAAGTCACGGGACCCGTTGGCAT 2420873
Query 146150 CCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGG 146185
|||||||||| || || || | || ||||| ||||
Sbjct 2420872 CCCAGATCTTCACTCCTTTCTCTGACAGCTCCTTGG 2420837
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590047406799400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |