Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq32 167 2e-36
seq15 120 3e-22
seq292 113 4e-20
>seq32
Length=3524602
Score = 167 bits (184), Expect = 2e-36
Identities = 468/706 (66%), Gaps = 22/706 (3%)
Strand=Plus/Minus
Query 133275 GTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATG 133334
||| ||| |||| || ||||||||||| || ||||| || || | |||||||||||||
Sbjct 2635625 GTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATG 2635566
Query 133335 TACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGTTTATGTTGCACTGCAATTCGTTC 133394
||||| || || ||| || ||||||| ||| || || || || |||
Sbjct 2635565 GGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTC 2635506
Query 133395 CAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCTCGTCGTCGTAGTTGTGAAAATGC 133454
||||||||||| || || | | || | ||||| | | | || || | ||
Sbjct 2635505 CAGTCCCACAG---GTCGG-----TCGGCGTC-TTCTC--CCACAT-GTCGT---ACTGG 2635461
Query 133455 AAAATACCCCTGCTCACCGGACTGTCCGTGTACGATTCATAGGGTCCGTTGATTTTGGCC 133514
| || ||| | || || || | || ||| | || ||||| ||| | |||
Sbjct 2635460 AGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCG 2635401
Query 133515 AGCTCGCAGCTAGCCTCCAAAGCGGCAAAGTAAATGGTTTCCGCGAT-TGAATAGTTGAC 133573
|| |||||||| ||||||| ||||| ||| ||||| || ||| || || |||||
Sbjct 2635400 AGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGAT-GTTGAG 2635342
Query 133574 GAACCTGGCATCGTCGCTATCGTAGGCGATGTCG-AGAAGAACAAACGCGTCGGCCAAAC 133632
| | ||| ||| ||| ||| | | ||||||| | || | || || ||||||| ||
Sbjct 2635341 CAGCTGGGCTTCGGGGCTTTCGAACG-GATGTCGCATCAGGATGAAGGCATCGGCCAGAC 2635283
Query 133633 CCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTGCTCCTCTCCGACTCGGCCGTGG 133692
|||| | ||||| ||||| || | || || ||| | |||| | |||| |
Sbjct 2635282 CCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGGACCG 2635223
Query 133693 GATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCGGACGATAATTTTAGTCAAATGTT 133752
| |||| |||| |||||||||||||||||| || ||||| | || || |
Sbjct 2635222 GGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACGGAGG 2635163
Query 133753 TCAGCAAAACATAGTCAAATGTCTTGGCGTCGACGTCGACGCACTTGTTGACGGCAATAC 133812
|||| |||| || ||| || | ||| |||| || |||||| ||| ||
Sbjct 2635162 CCAGCTTCTTGAAGTCGAAAGTCC--GCTCTGGCGT-GACGTACATGTTGAGGGCGATGG 2635106
Query 133813 TGGCTAGATTACAAACGGCCGTCTCGTTCTCGTCGCAATACTGGACGATCTCGGCGCAGA 133872
||| || || || |||||| ||||| || | | |||| || | ||| | |||||
Sbjct 2635105 AGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGCAGA 2635046
Query 133873 GGTTGCTGCATTTGATGGTGCCCAAAtttttttGATTGCTAAAGTTATTGCAATGATCCT 133932
|||||||||||||||||||||||| || | || ||||| | |||||| ||||
Sbjct 2635045 GGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGTCCT 2634986
Query 133933 TGTATAGCATGTACGGCCCGCCGGTTTCGACGTTGGTCTCGACGAT 133978
|||| |||||||| ||| ||||||||| | || ||||| |||
Sbjct 2634985 TGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGAT 2634940
>seq15
Length=4650977
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| ||| || ||||| || |||||||| || || ||||| ||| ||
Sbjct 569631 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 569690
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| || | |||||| || || || ||||||||||| ||
Sbjct 569691 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 569750
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | || | |||||| || ||| ||||| | ||| | ||||||
Sbjct 569751 ATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTTTTG 569810
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| ||||| ||||||||
Sbjct 569811 CCGGTGAGGGTTTTCACAAAGATCTGCAT 569839
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || |||||||| || ||||| || || ||||| ||| || |||||
Sbjct 564598 GTGGAGGGTGGATTCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 564657
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| || |||| || | |||||| || || || ||||||||||| || |||||
Sbjct 564658 CTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 564717
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | || | |||||| || ||| ||||| | ||| | |||||||||||
Sbjct 564718 GGCTTTGACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGT 564777
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || ||||| |||||||||
Sbjct 564778 GAGGGTCTTGACAAAGATCTGCATG 564802
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| ||| || ||||| || |||||||| || || ||||| ||| ||
Sbjct 569403 ACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 569462
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || ||||| |||| || | |||||| || || || ||||||||||| ||
Sbjct 569463 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 569522
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | || | |||||| || ||| |||| | ||| | ||||||
Sbjct 569523 ATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCCCCTCAAGGGTGATGGTTTTG 569582
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| || || || | || |||||||||
Sbjct 569583 CCGGTGAGGGTCTTGCCGAAGATCTGCATG 569612
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| ||||| ||||| || |||||||| ||| || ||||| |||||| |||||
Sbjct 564142 GTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTG 564201
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || || |||| || | |||||| || || || ||||||||||| || |||||
Sbjct 564202 CTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTT 564261
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | |||||| || || || || | ||| | || ||||||||
Sbjct 564262 GGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCCACTTCCAGGGTGATGGTCTTGCCGGT 564321
Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || |||||||||
Sbjct 564322 GAGGGTCTTGACGAAGATCTGCATG 564346
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||| | || ||||| || || |||||||| || || ||||| ||| ||
Sbjct 564365 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCC 564424
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||| || |||| || | |||||| || || || ||||||||||| ||
Sbjct 564425 AGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGG 564484
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | |||||| || ||| ||||| | ||| | || |||
Sbjct 564485 ATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCAACCTCCAGGGTGATGGTCTTG 564544
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| || || || || || |||||||||
Sbjct 564545 CCGGTGAGGGTCTTGACGAAGATCTGCATG 564574
Score = 82.4 bits (90), Expect = 7e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 118557 ATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGC 118616
|||||||| || || ||||| ||| || ||||| || ||||| |||| || | |
Sbjct 569202 ATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTC 569261
Query 118617 TGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTG 118676
||||| || || || ||||||||||| || ||||| ||| || | || | ||||
Sbjct 569262 TGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTCTCAATGGTG 569321
Query 118677 TCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 118736
|| || ||| || || | ||| | || ||||| || || || || || || ||||||
Sbjct 569322 TCACTGGGCTCAACTTCCAGGGTGATTGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGC 569381
Query 118737 ATG 118739
|||
Sbjct 569382 ATG 569384
>seq292
Length=796020
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| || || ||||| ||| ||
Sbjct 171448 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 171389
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| ||||| |||| || | |||||| || ||||| ||||| || || ||
Sbjct 171388 CAGCTGTTTACCAGCAAAGATTAGCCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTG 171329
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| || || | || | |||||| || ||| ||||| | ||| | || ||
Sbjct 171328 AATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTT 171269
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||||||| || |||||||||||
Sbjct 171268 CCCAGTGAGAGTTTTCACGAAAATCTGCAT 171239
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||||| || ||||| || || |||||||| || || ||||| ||| ||
Sbjct 171676 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 171617
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| ||||| |||| || | |||||| || ||||| ||||| || || ||
Sbjct 171616 CAGCTGTTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGAGGAATGCCTTCTTTATCCTG 171557
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| || || | || | ||| || || ||| ||||| | ||| | || ||
Sbjct 171556 AATCTTTGCCTTCACGTTCTCAATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTT 171497
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| || || ||||| || |||||||||||| ||
Sbjct 171496 CCCAGTGAGGGTTTTCACGAAAATCTGCATGCCT 171463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433809330077620
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