Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq15 127 2e-24
seq380 107 2e-18
seq428 104 3e-17
seq302 102 9e-17
seq763 98.7 1e-15
seq176 98.7 1e-15
seq2027 86.0 7e-12
seq652 86.0 7e-12
>seq15
Length=4650977
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| ||||| |||||||| |||| ||| || || | || || |||||||| || || ||
Sbjct 564611 TCTTTTTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 564670
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
|| || | ||||||||| | || | || |||||| ||| |||||| ||||| ||
Sbjct 564671 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGGATTTTGGCTTTGACGTTC 564730
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||||| | ||||| || | |||||||||||||| || || ||||| |||
Sbjct 564731 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTTTTGCCGGTGAGGGTCTTGACA 564790
Query 43173 AAGATTTGCATTTTTACG 43190
||||| ||||| ||| ||
Sbjct 564791 AAGATCTGCATGTTTGCG 564808
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | |||| || | |||| || || || || ||||| |||| |
Sbjct 569385 CCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAC 569444
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| ||||| || || || | ||||||||| | ||
Sbjct 569445 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 569504
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||| ||| |||||| |||| || | | ||||| || | ||| |
Sbjct 569505 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCCCCC 569564
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| || || ||||| | ||||| |||||
Sbjct 569565 TCAAGGGTGATGGTTTTGCCGGTGAGGGTCTTGCCGAAGATCTGCAT 569611
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || || | ||| | |||| || | |||| || || || || ||||| |||| |
Sbjct 569613 CCACCCCTGAGACGGAGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCAGAC 569672
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| || || || || || | ||||||||| | ||
Sbjct 569673 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 569732
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||| ||| ||| || || | || | | ||||| || | |||||
Sbjct 569733 ATGCCCTCCTTATCCTGGATCTTGGCCTTAACATTCTCAATGGTGTCACTGGGCTCCACC 569792
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186
|| | |||||||||||||| || || || || |||||||| ||||| ||
Sbjct 569793 TCAAGGGTGATGGTTTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCTT 569842
>seq380
Length=662588
Score = 107 bits (118), Expect = 2e-18
Identities = 70/77 (91%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
||||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 548190 ATTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 548249
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 548250 CACTATACTAACGAGGA 548266
>seq428
Length=446940
Score = 104 bits (114), Expect = 3e-17
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 60053 TATGAAAAATTTT---CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109
||||||||| || |||| || | ||||||||||||| ||||||||||||||||||||
Sbjct 276978 TATGAAAAAGTTGTGCCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 276919
Query 60110 GACATACTCACCACTATACTACCGAGGA 60137
| |||||||||||||||||| ||||||
Sbjct 276918 GGGATACTCACCACTATACTAACGAGGA 276891
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 410253 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 410194
Query 60126 TACTACCGAGGATTGA 60141
||||| |||||| |||
Sbjct 410193 TACTAACGAGGAGTGA 410178
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 306066 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 306007
Query 60126 TACTACCGAGGATTG 60140
||||| |||||| ||
Sbjct 306006 TACTAACGAGGAATG 305992
>seq302
Length=968941
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 207958 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 207899
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 207898 TATACTAACGAGGA 207885
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
|| |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 229527 TTACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 229468
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 229467 CTATACTAACGAGGA 229453
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||
Sbjct 226301 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 226360
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 226361 TATACTAACGAGGA 226374
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 228890 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 228831
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 228830 TACTAACGAGGA 228819
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 214080 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 214021
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 214020 TACTAACGAGGA 214009
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 226730 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 226789
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 226790 TACTAACGAGGA 226801
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| |||||||||||||
Sbjct 228155 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 228096
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 228095 TACTAACGAGGA 228084
Score = 89.7 bits (98), Expect = 6e-13
Identities = 57/62 (92%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAG 60135
|||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 209088 GGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTATACTAACGAG 209029
Query 60136 GA 60137
||
Sbjct 209028 GA 209027
>seq763
Length=119288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 13128 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 13069
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 13068 TACTAACGAGGA 13057
>seq176
Length=1459804
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 269952 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 269893
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 269892 TACTAACGAGGA 269881
>seq2027
Length=1428
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||| | ||||| ||||||
Sbjct 1085 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGAAGATACTGTCCACTA 1144
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1145 TACTAACGAGGA 1156
>seq652
Length=179840
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||| ||||| |||||||| |||||||||||| ||||| |||||||
Sbjct 137834 CTCCCCGTCGGGGAATCTAACCCCGGTCTCCCACGTGACAGGCGGGGATACTGACCACTA 137893
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 137894 TACTAACGAGGA 137905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571789116335800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |