Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq32 150 4e-31
>seq32
Length=3524602
Score = 150 bits (166), Expect = 4e-31
Identities = 638/1005 (63%), Gaps = 42/1005 (4%)
Strand=Plus/Plus
Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496
|| |||||| | || ||| | ||||| |||||| | | |||||| ||||||| ||
Sbjct 2633782 GATGGGCGCCAGGAGCGCGTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGC 2633841
Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556
|| || ||| | || |||| || |||| | ||| || ||| || || ||||
Sbjct 2633842 TACGGCCTGAACCCGGACTTTGTGGATCCAGCTCAGATCACCATGAAGGTGATCCAGGGC 2633901
Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616
| |||| ||| || || || || || ||||| |||| ||||||| ||||| |
Sbjct 2633902 TTGTACAGCGGCGTCACCACCGTGGAGCTAGACACGCTAGCGGCGGAGATCGCGGCCACC 2633961
Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676
|| ||| ||||||||||||| | | ||||||| |||||| |||||||| | ||
Sbjct 2633962 CTGACGACCAAACACCCCGACTACGCCATCCTGGCCGCGAGGATTGCCGTCTCCAACCTG 2634021
Query 248677 CACAAAGAAACGAAAGAGTCGTTCGTCGAAACCATGGCTGACCTACATGCCTATG----- 248731
||||| || || || || |||| ||| |||| ||||| ||||| |
Sbjct 2634022 CACAAGGAGACCAAGAAGGTGTTCAGCGAGGTGATGGAAGACCTGTTCGCCTACGTCAAC 2634081
Query 248732 -------------GG---------ATGGTCGCC--GATGACG-TCCACACCGTCATTCAG 248766
|| ||| || || | |||| || ||| |||||| |
Sbjct 2634082 CCTCTGAACAAACGGCACTCTCCCATGATCTCCAAGGAGACGCTCGACATCGTCAT---G 2634138
Query 248767 GACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTC 248826
|| ||| | ||| ||| | | | || |||| || |||||| ||| | |||
Sbjct 2634139 GAAAACAAGGACCGCCTCAATTCCTCCATCATTTACGACAGAGATTTCTCCTACAACTTC 2634198
Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886
|| | |||||| || |||||| || || || || || || | || || | | ||
Sbjct 2634199 TTCGGTTTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAG 2634258
Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946
|| ||||||||| | ||| | ||| | || ||||| ||| | ||||| || ||
Sbjct 2634259 CGGCCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGA-CGC 2634317
Query 248947 GTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGC 249004
||| ||||||| |||| | || || ||| | || || ||| | ||||| |
Sbjct 2634318 -TGCCATCGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCC 2634376
Query 249005 TCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAG 249064
||||||||||||| ||| | |||||| | ||||| || || ||||| | |
Sbjct 2634377 TCTTCAACGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGG 2634436
Query 249065 ACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCG 249124
||||| |||| ||||| || ||||| || || ||| ||| ||||| || | ||
Sbjct 2634437 ACGACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCG 2634496
Query 249125 CGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTA 249184
| || || ||||| | | || | ||||||| ||| ||| ||||| || |
Sbjct 2634497 CTGGGGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATTGCCGGCA 2634556
Query 249185 CAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGT 249244
| || || | | || | || || | || || | | ||| || | |
Sbjct 2634557 CCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCT 2634616
Query 249245 TCATCAACCAGGCCGGGCGCCGAAAG----GGGTCGTTCGCCATGTATTTGGAAGTGTGG 249300
| || |||||| | ||| | | || ||| | ||||||||||| ||||| ||||
Sbjct 2634617 ACGTCGACCAGGGC-GGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGG 2634675
Query 249301 CACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGA 249360
||| ||| | || || |||||||| |||| ||||||| || || ||| ||||
Sbjct 2634676 CACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGA 2634735
Query 249361 GCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405
|| | ||||| ||||||| | ||||| || | ||| ||||||||
Sbjct 2634736 GCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATG 2634780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073711575836480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |