Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq32 150 4e-31 >seq32 Length=3524602 Score = 150 bits (166), Expect = 4e-31 Identities = 638/1005 (63%), Gaps = 42/1005 (4%) Strand=Plus/Plus Query 248437 GACGGGCGCAAAGAAAACGTTCTCTTCGACAAAATCTCGGCGCGCATCAAGAAGCTCTGT 248496 || |||||| | || ||| | ||||| |||||| | | |||||| ||||||| || Sbjct 2633782 GATGGGCGCCAGGAGCGCGTCATGTTCGATAAAATCACCTCCCGCATCCAGAAGCTTTGC 2633841 Query 248497 TATGGTCTGGAACCCAACTTCGTCGATCATGTGGCCATCGCCCAGAAAGTTATTTCGGGC 248556 || || ||| | || |||| || |||| | ||| || ||| || || |||| Sbjct 2633842 TACGGCCTGAACCCGGACTTTGTGGATCCAGCTCAGATCACCATGAAGGTGATCCAGGGC 2633901 Query 248557 GTCTACACCGGAGTAACAACGACAGAACTGGACACCTTAGCTGCGGAGACGGCGGCGTAC 248616 | |||| ||| || || || || || ||||| |||| ||||||| ||||| | Sbjct 2633902 TTGTACAGCGGCGTCACCACCGTGGAGCTAGACACGCTAGCGGCGGAGATCGCGGCCACC 2633961 Query 248617 ATGGCGATTGCACACCCCGACTACTCGCTGCTGGCCGGGAGGATCGCCGTCTCAAGGCTT 248676 || ||| ||||||||||||| | | ||||||| |||||| |||||||| | || Sbjct 2633962 CTGACGACCAAACACCCCGACTACGCCATCCTGGCCGCGAGGATTGCCGTCTCCAACCTG 2634021 Query 248677 CACAAAGAAACGAAAGAGTCGTTCGTCGAAACCATGGCTGACCTACATGCCTATG----- 248731 ||||| || || || || |||| ||| |||| ||||| ||||| | Sbjct 2634022 CACAAGGAGACCAAGAAGGTGTTCAGCGAGGTGATGGAAGACCTGTTCGCCTACGTCAAC 2634081 Query 248732 -------------GG---------ATGGTCGCC--GATGACG-TCCACACCGTCATTCAG 248766 || ||| || || | |||| || ||| |||||| | Sbjct 2634082 CCTCTGAACAAACGGCACTCTCCCATGATCTCCAAGGAGACGCTCGACATCGTCAT---G 2634138 Query 248767 GACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTC 248826 || ||| | ||| ||| | | | || |||| || |||||| ||| | ||| Sbjct 2634139 GAAAACAAGGACCGCCTCAATTCCTCCATCATTTACGACAGAGATTTCTCCTACAACTTC 2634198 Query 248827 TTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAA 248886 || | |||||| || |||||| || || || || || || | || || | | || Sbjct 2634199 TTCGGTTTCAAGACTCTGGAGCGCTCCTACCTGCTGAAGATCAACGGGAAAGTGGCCGAG 2634258 Query 248887 CGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGC 248946 || ||||||||| | ||| | ||| | || ||||| ||| | ||||| || || Sbjct 2634259 CGGCCGCAGCACATGCTCATGAGGGTGTCGGTTGGGATCCACGGGCGAGACATTGA-CGC 2634317 Query 248947 GTGC--TCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGC 249004 ||| ||||||| |||| | || || ||| | || || ||| | ||||| | Sbjct 2634318 -TGCCATCGAGACCTACAACCTCCTGTCGGAGAAGTGGTTCACCCACGCCTCTCCGACCC 2634376 Query 249005 TCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAG 249064 ||||||||||||| ||| | |||||| | ||||| || || ||||| | | Sbjct 2634377 TCTTCAACGCCGGGACCAACCGGCCGCAGCTGTCCAGCTGCTTCCTGCTCACCATGAAGG 2634436 Query 249065 ACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACGGCGAAGATTTCTAAATTCG 249124 ||||| |||| ||||| || ||||| || || ||| ||| ||||| || | || Sbjct 2634437 ACGACAGCATCGAAGGCATCTACGACACCCTGAAGCAGTGCGCGCTCATTTCCAAGTCCG 2634496 Query 249125 CGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTA 249184 | || || ||||| | | || | ||||||| ||| ||| ||||| || | Sbjct 2634497 CTGGGGGGATCGGCGTGGCGGTGAGCTGCATCCGATCGACGGGAAGCTACATTGCCGGCA 2634556 Query 249185 CAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGT 249244 | || || | | || | || || | || || | | ||| || | | Sbjct 2634557 CCAACGGCAACTCCAACGGATTGGTCCCGATGCTGAGAGTTTACAACAACACGGCTCGCT 2634616 Query 249245 TCATCAACCAGGCCGGGCGCCGAAAG----GGGTCGTTCGCCATGTATTTGGAAGTGTGG 249300 | || |||||| | ||| | | || ||| | ||||||||||| ||||| |||| Sbjct 2634617 ACGTCGACCAGGGC-GGCAACAAGAGACCCGGGGCCTTCGCCATGTACCTGGAACCGTGG 2634675 Query 249301 CACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGA 249360 ||| ||| | || || |||||||| |||| ||||||| || || ||| |||| Sbjct 2634676 CACTTCGACGTGTTCGACTTCCTGGAGCTGAAGAAGAACACAGGAAAGGAGGAGCAGAGA 2634735 Query 249361 GCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATG 249405 || | ||||| ||||||| | ||||| || | ||| |||||||| Sbjct 2634736 GCCAGAGACCTTTTCTACGCCTTGTGGATCCCGGACCTGTTCATG 2634780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073711575836480