Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq32 470 1e-127
seq146 118 9e-22
seq15 98.7 9e-16
>seq32
Length=3524602
Score = 470 bits (520), Expect = 1e-127
Identities = 1032/1539 (67%), Gaps = 29/1539 (2%)
Strand=Plus/Minus
Query 22409 TCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAAC 22468
|||||||||| ||| | |||| || |||| || ||| |||| || | || |||
Sbjct 2635721 TCGTTCCACAGGCCGCGCTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAAC 2635662
Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528
|| ||||||| || | ||| ||| |||||| ||| ||| |||| || || |||
Sbjct 2635661 TCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTG 2635602
Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588
|| ||||| ||||| ||||| || || || ||||| ||||||| ||| || ||| |||
Sbjct 2635601 TTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTC 2635542
Query 22589 AAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTC 22648
| |||||| || | || || ||| |||| | |||||||||||| |||| |||||||
Sbjct 2635541 ACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCGGTCGGCGTC 2635482
Query 22649 ACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGC-TGCCTTCGTACGT 22707
|| |||||||| ||||| || | | ||| ||| | ||||| ||| ||||| ||
Sbjct 2635481 ---TTCTCCCACATGTCGTACTGGAGGATGCCCTTACT-GACGGGCGAGCCCTCGTATGT 2635426
Query 22708 TTCGTACGGACC-ATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATA 22766
||||| || || | | | ||||| ||||||||||| ||||||| ||| ||| || |
Sbjct 2635425 CTCGTAGGGGCCGAGCTCT-GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGA 2635367
Query 22767 TAGTCTCGAAGATTTTCTTGTTCAATTCGGC--GGCGGCGACGCTTTCGTACGGCATACG 22824
| ||||||||||| | |||| | | || ||| || ||||||| |||| ||
Sbjct 2635366 TGGTCTCGAAGATCTGGATGTTGA--GCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCG 2635309
Query 22825 CATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAG 22884
||||| | ||| || || |||| |||||| ||||| || |||||||| | || |
Sbjct 2635308 CATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTT 2635249
Query 22885 ATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTT 22944
|| ||| | || ||||| | || || |||| ||||| | |||| | |||
Sbjct 2635248 GTTGGACGTCTCGGCTTCGGGGACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTT 2635189
Query 22945 TCTGGTCACAATT---TTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001
| |||| ||| || || | | |||||| || | | | |
Sbjct 2635188 T---TTCACGATTACCTTGGTGACGGAGGCCAGCTTCTTGAAGTCGAAAGTCCGCTCTGG 2635132
Query 23002 TACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA 23061
|| || |||||| |||||| ||||| || ||||| |||||||||||||| |||
Sbjct 2635131 CGTGACGTACATGTTGAGGGCGATGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCT 2635072
Query 23062 CGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTG 23121
|||||||| || | || || || || ||||| || || || ||||||| || |||
Sbjct 2635071 GGTGTACTCCACCACCTCTGTGCAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTG 2635012
Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181
|||||| || | ||||| | ||||||||||||||||| ||||| || || ||| |||
Sbjct 2635011 GTTGCTCTTCCTGTTGCAAGCGTCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTG 2634952
Query 23182 CGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGT--ACCTGCCT 23239
||||||||||| || ||| | ||| || | ||| | | | | ||| |||
Sbjct 2634951 GGACTCGATGATGGCGTACCAGAGCTGCTGCGCCT--TCACCACCCTCTTCACCCTCCCT 2634894
Query 23240 TCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCG 23299
|| | ||| || | ||| | | || || || | || | || ||| |||| |||
Sbjct 2634893 TCCTTCTCATATCTGGTGTAGAGCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCG 2634834
Query 23300 GGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAA 23359
|| | | | |||||||| | ||| || | || || | |||| ||
Sbjct 2634833 GGACACTCGCTGGGACACATCAAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAAC 2634774
Query 23360 AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTG 23419
|| ||||| ||||| | |||||||| || || | ||| | | |||||| || || |||
Sbjct 2634773 AGGTCCGGGATCCACAAGGCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG 2634714
Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479
||||| |||| |||| ||||| |||||||| |||||||| || ||||| | |||
Sbjct 2634713 TTCTTCTTCAGCTCCAGGAAGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCG 2634654
Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539
|| || || |||||||| ||||||||||| |||||||| || |||||||||||||| |||
Sbjct 2634653 AAGGCCCCGGGTCTCTTGTTGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACT 2634594
Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTT-- 23597
|| |||||||| || | |||||||| |||| ||| || | | | |||
Sbjct 2634593 CTCAGCATCGGGACCAATCCGTTGGAGTTGCCGTTGGTGCCGGCAA----TGTAGCTTCC 2634538
Query 23598 --TTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGC 23655
| | ||| | | | || | || || || || | || || || || | |||
Sbjct 2634537 CGTCGATCGGATGCAGCTCACCGCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGC 2634478
Query 23656 GCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAA 23715
||| || ||||| |||||||||||||| ||||||||||| || || | | || || |||
Sbjct 2634477 GCACTGCTTCAGGGTGTCGTAGATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAA 2634418
Query 23716 ACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGT 23775
|| |||| |||| | || |||| ||| || ||||| |||||| ||
Sbjct 2634417 GCAGCTGGACAGCTGCGGCCGGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGT 2634358
Query 23776 AAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTG 23835
|| | | ||||| || ||||| || |||||||| || |||||||| |||||
Sbjct 2634357 GAACCACTTCTCCGACAGGAGGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTG 2634298
Query 23836 TATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAAT 23895
|| || | | || | ||| | ||||| || || | |||| || ||||| ||
Sbjct 2634297 GATCCCAACCGACACCCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGAT 2634238
Query 23896 TTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAA 23934
|| | ||| || || || | || || || || || ||
Sbjct 2634237 CTTCAGCAGGTAGGAGCGCTCCAGAGTCTTGAAACCGAA 2634199
>seq146
Length=1599760
Score = 118 bits (130), Expect = 9e-22
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106
|||||| ||| | ||||| || || || || || || |||||||| |||| || ||
Sbjct 271714 CACCTCATCTCTACTTGTGTATTCGACGATCTCTGTGCAGAGATTGCTGGACTTGATGGT 271773
Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166
||||| ||| ||||||| | || | ||||| | |||||||||||||||||||||||
Sbjct 271774 GCCCAGATTTTGCTGGTTGGTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTACGGCGT 271833
Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGC 23196
|||||||| ||||||||||||||| ||
Sbjct 271834 ACCCGTCTCTGTCTGCGACTCGATGATGGC 271863
Score = 114 bits (126), Expect = 1e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399
|||| || || ||||||| || || || ||||| | || ||||||| || | ||| |
Sbjct 272182 TTTCCACTCGCTTCATAAAGAGGTCTGGAATCCACAAGGCAAAGAACAGGTCTCTGGCTC 272241
Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459
| ||| ||||| || |||||||| |||| |||||||| || |||||||| |||||||
Sbjct 272242 TCTGCTCTTCTTTACCCGTGTTCTTCTTCAGCTCCAAAAACTCAAACACGTCAGCATGCC 272301
Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCT 23495
||||||| ||||| || | || || || |||||||
Sbjct 272302 ACGGCTCCAGGTACACAGAGAAGGCCCCTGGTCTCT 272337
>seq15
Length=4650977
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||||||||| || || || ||||| || || |||||||| |||||| | || || || |
Sbjct 564806 CAAACATGCAGATCTTTGTCAAGACCCTCACCGGCAAAACCATCACCCTGGAGGTGGAGC 564747
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||| | || | |||||| | ||| ||| ||||| ||| | || || |
Sbjct 564746 CCAGCGACACCATTGAGAACGTCAAAGCCAAAATCCAGGATAAGGAGGGCATCCCCCCTG 564687
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||| | || || || || || || ||| ||||||| || || || |
Sbjct 564686 ACCAGCAGAGGCTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACT 564627
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || || ||||||||||| || || || || || || | |||||||| ||
Sbjct 564626 ACAATATCCAAAAAGAATCCACCCTCCACCTTGTCCTCCGTCTGAGGGGTGG 564575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445744195261200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |