Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq183 163 2e-35 >seq183 Length=1386350 Score = 163 bits (180), Expect = 2e-35 Identities = 183/242 (76%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 91815 CCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA-CTGGAACAAAGTGGC 91873 ||| ||| ||||||| ||||||||||| ||||| | ||| ||| || || | || ||| Sbjct 1306025 CCTCCAAGGAGGACTGCAACATCATCACTGACACAG-CAGCCAAGCTCGAGCGCAGCGGC 1306083 Query 91874 TTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCTGCGCAACTCGGCACTG 91933 ||||||||||| || |||| || |||||||| || || ||||| |||||| | | ||| Sbjct 1306084 TTCTACTGGGGCCCGCTGGGAGTGGAGGAGGCCCACCGCATGCTCCGCAACGCCCCGCTG 1306143 Query 91934 GGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTTCACGCTGTCGTATCAC 91993 ||||||| || || || || ||| |||| ||||||||||| ||||| ||||| |||||| Sbjct 1306144 GGCAGCTACCTTATCCGCGACAGCCGGCAGAAGGACGTCTTCTTCACCCTGTCCTATCAC 1306203 Query 91994 TCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAGGACAAGCAATTTTCCTTGGCT 92053 || ||||||||||| ||| | || || |||||| | || | || || |||| Sbjct 1306204 GACAAGAAAGGACCCGTCAGCGTGCGCATCGACTACAAGCAGCAGAAGTTCTCTCTGGCC 1306263 Query 92054 GG 92055 || Sbjct 1306264 GG 1306265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356216298735955