Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28]
3,985 sequences; 748,923,461 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq32 450 2e-121
seq169 102 1e-16
seq22 93.3 6e-14
>seq32
Length=3524602
Score = 450 bits (498), Expect = 2e-121
Identities = 1302/1979 (66%), Gaps = 31/1979 (2%)
Strand=Plus/Minus
Query 78966 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCT 79025
|||||||||||| | ||| || | | | ||||| ||||| || ||||| | |
Sbjct 2635764 CTGAATGGATCCGTTGTTTGCGATCAGCTTGTTCTTCATCTCCTCGTTCCACAGGCCGCG 2635705
Query 79026 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 79085
||| || | | | ||||| || || || || | || || ||||| |||| || ||
Sbjct 2635704 CTCCGTCAGGTCCTTGAGGAGGTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCT 2635645
Query 79086 CCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGC 79145
|| ||||| || || ||||| || | || | || || || || |||| || || ||
Sbjct 2635644 GCGGGTGTAGATGTTGCTGGTGTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGC 2635585
Query 79146 AGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGAT 79205
|| || ||||| ||||| || |||| || | || || || | |||| | |||
Sbjct 2635584 GGTGGACGCCGTGGGCATGGGCGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGAT 2635525
Query 79206 TTTATCTTTTAG-AGATTCCCAATCCCAAAGATCAGACGG-GACAACATTCCAAAGATCA 79263
|| || || || || |||| | ||||| || || | ||| | | | | ||| | ||
Sbjct 2635524 CTTCTCCTTCAGCAGCTTCC-AGTCCCACAGGTCGGTCGGCGTCTTC-TCCCACATGTCG 2635467
Query 79264 TATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTT 79323
|| || || || || ||||| || || || |||||| || || || || || |
Sbjct 2635466 TACTGGAGGATGCCCTTACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCT 2635407
Query 79324 TCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTA 79383
|||| | ||| || || ||||| | || ||| || ||||| ||||| |||| |
Sbjct 2635406 GCGGCGAGTTCGCAGCTGGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATG 2635347
Query 79384 TTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCT 79443
||||| || ||||| |||| || || |||| | || || || || || ||
Sbjct 2635346 TTGAGCAGCTGGGCTTCGGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCC 2635287
Query 79444 AATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGA 79503
| || || || || || ||||| || || || | ||| || || | || ||||| ||
Sbjct 2635286 AGACCCTGGACGCCGATCCCGATCGGCCTGTGGCGCTTGTTGGACGTCTCGGCTTCGGGG 2635227
Query 79504 ATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACA 79563
| || || ||||| || || || || || ||||| || | || ||||| ||| ||
Sbjct 2635226 ACCGGGTAGTAATTGATGTCGATGATCTTGTTGAGGTTTTTCACGATTACCTTGGTGACG 2635167
Query 79564 TCCTTTAGTTTGAGAAAATCAAATCGTCCA-TCTA---TTACAAACATGTTCAACGCGAC 79619
|| || || || || |||| ||| | || ||||||| | ||||
Sbjct 2635166 GAGGCCAGCTTCTTGAAGTCGAAA-GTCCGCTCTGGCGTGACGTACATGTTGAGGGCGAT 2635108
Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCC--GCATATTGTATTATTTCAGTG 79677
|| ||||| || || ||||| ||||| | | | | | || | | | || |||
Sbjct 2635107 GGAGGCCAGGTTGCAGACGGCCACCTCGTC--CTTGCTGGTGTACTCCACCACCTCTGTG 2635050
Query 79678 CAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 79737
|||||||| || || || ||||| || | || || || || ||||| |||| || ||
Sbjct 2635049 CAGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCG 2634990
Query 79738 TCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 79797
||||| || || ||| | || || || ||||| |||| || || || || || | ||||
Sbjct 2634989 TCCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCAG 2634930
Query 79798 A-CGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATT--GTGTATAT 79854
| | || | ||||| | | ||| ||| ||| | || ||| ||||| |
Sbjct 2634929 AGCTGCT-GCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGTGTAGAG 2634871
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
|| |||||||| |||||||| ||||| | || ||||| ||| |||||||||
Sbjct 2634870 CTTC--TCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATC 2634813
Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 79973
|| ||||| || | || |||| ||||| || || || || ||||| | ||
Sbjct 2634812 AAGGACCAGTCCTGGTTGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCG 2634753
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| ||| || ||||||| ||| |||||||| |||||||| ||||| || || || |||||
Sbjct 2634752 TAGAAA-AGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTGTTCTTCTTCAGCTCCAGGAA 2634694
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| | | || | ||||||||||||| ||| ||||| | | || |||| |||||
Sbjct 2634693 GTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGTT 2634634
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | ||| ||||| || |||||||||| ||| || | | ||
Sbjct 2634633 GCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCC 2634574
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
||||| | || ||||| |||| || |||||||| | | || || || | |
Sbjct 2634573 GTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCCCGTCGATCGGATGCAGCTCACCGC 2634514
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273
| || || ||||| || || || || | ||||| | || | || || |||||
Sbjct 2634513 CACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGAT 2634454
Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333
||| || ||||| || || ||||| | || || || ||||| |||| || | || |
Sbjct 2634453 GCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGACAGCTGCGGCCGGTT 2634394
Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393
|| || || || || | ||| ||||| ||||| || ||||| || || ||||| || ||
Sbjct 2634393 GGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGGTT 2634334
Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453
||| ||||| || || | || || || | || || || |||| || | ||| |
Sbjct 2634333 GTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACACCCTCATGAG 2634274
Query 80454 CATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAA 80513
||||||||| || | || | | || || || |||| || ||| || ||||
Sbjct 2634273 CATGTGCTGCGGCCGCTCGGCCACTTTCCCGTTGATCTTCAGCAGGTAGGAGCGCTCCAG 2634214
Query 80514 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573
||| || ||||| || ||||||| || || |||| |||||||| || || |||||
Sbjct 2634213 AGTCTTGAAACCGAAGAAGTTGTAGGAGAAATCTCTGTCGTAAATGATGGAGGAATTGAG 2634154
Query 80574 TTTATCCTTATATTTGTTAACTACATCCATGGTGATACTT-GAAATAATCGGAGAATGTT 80632
||||| | || | || | || | || | ||| || || || ||||| ||
Sbjct 2634153 GCGGTCCTTGTTTTCCATGACGATGTCGAGCGT-CTCCTTGGAGATCATGGGAGAGTG-- 2634097
Query 80633 TCCCATTTTT---AGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 80689
|| || || ||| || || ||| ||| | || |||||||| || || || | |
Sbjct 2634096 -CCGTTTGTTCAGAGGGTTGACGTAGGCGAACAGGTCTTCCATCACCTCGCTGAACACCT 2634038
Query 80690 tttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTG 80749
| || || |||||||| || || || ||||| || || ||||| | ||||| || || |
Sbjct 2634037 TCTTGGTCTCCTTGTGCAGGTTGGAGACGGCAATCCTCGCGGCCAGGATGGCGTAGTCGG 2633978
Query 80750 GATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTG 80809
| |||| || || ||||| || || || || || || ||||| | || || || |
Sbjct 2633977 GGTGTTTGGTCGTCAGGGTGGCCGCGATCTCCGCCGCTAGCGTGTCTAGCTCCACGGTGG 2633918
Query 80810 TTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGAT 80869
| || || | || | || ||||| |||||||| | || | | ||||| | | |
Sbjct 2633917 TGACGCCGCTGTACAAGCCCTGGATCACCTTCATGGTGATCTGAGCTGGATCCACAAAGT 2633858
Query 80870 CAGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATGAC 80927
| | ||| | ||| || || || |||| || || || ||||||||||| ||||||||
Sbjct 2633857 CCGGGTTCAGGCCGTAGCA-AAGCTTCTGGATGCGGGAGGTGATTTTATCGAACATGAC 2633800
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/169 (73%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844
|||| |||||||| ||||| || || ||||| || |||| || || || ||||| |
Sbjct 2636027 TCCAGCCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTCGGCTCAGCGATGTGGATGT 2635968
Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904
||| || || || || |||||||||||||| | |||||| ||||| | | | ||||
Sbjct 2635967 TCAGCGACTGGCTCTGGTCGATGAAGGCTCCACGGTCTGCCGCCATCCTCAGCACGGTCT 2635908
Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGG 78953
| || | |||||||||| |||||||| | |||| | || |||||
Sbjct 2635907 TCTGGGAGATTTCCCAAACGGTTTTATACAGCTGCTTCAGGTCCTCTGG 2635859
>seq169
Length=1474717
Score = 102 bits (112), Expect = 1e-16
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||||| ||| || || |||||| || || || || ||||| ||||| | ||| |
Sbjct 1314851 CCTCGTCTCGACTGATGAGCTCGTTGCTGAAGGTTAGGCCAGGCATCAGGCCTCTCTTCT 1314792
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| || |||| || || || ||||| ||||||||||| || || || || ||||
Sbjct 1314791 TCAGCCAGAAGATGGCGGCGAACGAACCAGAGAAGAAGATTCCCTCCACGGCAGCGAAGG 1314732
Query 50102 CAACAAGTCTCTCTCC 50117
| || | |||||||||
Sbjct 1314731 CCACCACTCTCTCTCC 1314716
>seq22
Length=4020106
Score = 93.3 bits (102), Expect = 6e-14
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
||||||| || ||||| ||||||||||| | || || || ||||| ||||| | ||| |
Sbjct 3875968 CCTCGTCCCTGCTAATGAGTTCGTTGGAGTAGGTAAGGCCTGGCATGAGGCCTCTCTTCT 3875909
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| | || | || ||||| || || |||||||| || || ||||| || || |
Sbjct 3875908 TCAGCCAGTAGATAGCAGCGAATGAGCCTGAGAAGAAGATCCCCTCCACTGCTGCGAAAG 3875849
Query 50102 CAACAAGTCTCTCTCC 50117
| ||||| | ||| ||
Sbjct 3875848 CCACAAGACGCTCCCC 3875833
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718233021235400
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