Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 8e-11 >seq15 Length=4650977 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || | | ||| | ||| | || | ||||||||||| || |||||||| ||| Sbjct 564116 TGGCCACCCCTCAGACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAGTCG 564175 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 || |||| || || || || || || ||| ||||||| | ||||| || || Sbjct 564176 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGG 564235 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || ||||| || || || ||||| || | | || | ||||| ||||||| Sbjct 564236 GGGATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGTTCC 564295 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| | || | ||||||||||| | || || ||||| || ||||| Sbjct 564296 ACTTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 564345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506989144345200