Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq292 84.2 1e-11 >seq292 Length=796020 Score = 84.2 bits (92), Expect = 1e-11 Identities = 167/245 (68%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 ||||| || || || || | || | ||||| || | || ||||| || || || || Sbjct 171475 AATCTGCATGCCTCCCCTCAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTT 171416 Query 33193 GTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTG 33252 ||| || |||| || | || |||| || || ||| ||| |||| | ||||| Sbjct 171415 GTAGTCCGACAGGGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATTAGCCTCTGCTG 171356 Query 33253 GTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTC 33309 ||| | || ||||||||||| || |||| ||| || || | | ||| ||||| Sbjct 171355 GTCAGGAGGAATGCCTTCTTTATCCTGAATCTTTGCC---TTCACGTTCTCAATGGTGTC 171299 Query 33310 GTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||| | || ||||| || || || || || || |||||||| |||||||| ||||| Sbjct 171298 ACTGGGCTCCACCTCCAGGGTAATGGTCTTCCCAGTGAGAGTTTTCACGAAAATCTGCAT 171239 Query 33370 GTTTA 33374 |||| Sbjct 171238 CTTTA 171234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318762117868530